RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 BNIPLQ7Z465 357 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 ING5Q8WYH8 240 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 PPP1R10Q96QC0 940 aaKnown RBP20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 ABCG4Q9H172 646 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 KRCC1Q9NPI7 259 aaPredicted RBP20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 CDY1Q9Y6F8 540 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 TGFB3P10600 412 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 POMGNT2Q8NAT1 580 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 CATSPER2Q96P56 530 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 CAMKK2Q96RR4 588 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 RMND5AQ9H871 391 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 FAM50BQ9Y247 325 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 CASKIN2Q8WXE0 1202 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 KIF2CQ99661 725 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 RBBP8Q99708 897 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 TLE6Q9H808 572 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 TBC1D13Q9NVG8 400 aa20.77■□□□□ 0.92
CDC42BPB-201ENST00000361246 SMIM22K7EJ46 135 aa20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 TUFMP49411 452 aaKnown RBP20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 RARRES1P49788 294 aa20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 TGM3Q08188 693 aa20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 COLGALT2Q8IYK4 626 aa20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 TDRD5Q8NAT2 981 aaKnown RBP20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 UBA2Q9UBT2 640 aaPredicted RBP20.77■□□□□ 0.91
CDC42BPB-201ENST00000361246 E5RJQ4 531 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 NEDD8-MDP1E9PL57 170 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 CYP2A6P11509 494 aaPredicted RBP20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 GRK4P32298 578 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 ABL2P42684 1182 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 GSTA3Q16772 222 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 ZC3H12AQ5D1E8 599 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 GULP1Q9UBP9 304 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 ST3GAL5Q9UNP4 418 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 POLR1DQ9Y2S0 133 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 TARBP2Q15633 366 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 NPNTQ6UXI9 565 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 DSG4Q86SJ6 1040 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 TNIP2Q8NFZ5 429 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 GFM2Q969S9 779 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 DLC1Q96QB1 1528 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 RETSATQ6NUM9 610 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 CHPFQ8IZ52 775 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 TBL1YQ9BQ87 522 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 NDEL1Q9GZM8 345 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 VTI1BQ9UEU0 232 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 KIAA1257Q9ULG3 409 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 KDM4FA0A1W2PPD8 638 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 GSAPA4D1B5 854 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 RRM2P31350 389 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 TNFSF9P41273 254 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 CCZ1BP86790 482 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 CCZ1P86791 482 aaPredicted RBP20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 MAP2K5Q13163 448 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 USP39Q53GS9 565 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 PRUNE1Q86TP1 453 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 CMTM5Q96DZ9 223 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 SLC28A3Q9HAS3 691 aa20.76■□□□□ 0.91
CDC42BPB-201ENST00000361246 TRPC5OSA6NMA1 111 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 INPP4BO15327 924 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 OR56A5P0C7T3 313 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 RARGP13631 454 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 ATP5C1P36542 298 aaKnown RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 PKN1Q16512 942 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 DNAJC14Q6Y2X3 702 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 UBE2Q2Q8WVN8 375 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 EMID1Q96A84 441 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 GRAMD1AQ96CP6 724 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 ELOVL4Q9GZR5 314 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 RGS18Q9NS28 235 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 F8VZ95 297 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 CRADDP78560 199 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 CFAP52Q8N1V2 620 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 PLK2Q9NYY3 685 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 PREX1Q8TCU6 1659 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 A0A1W2PQJ5 194 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 DLG4P78352 724 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 C15orf59Q2T9L4 293 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 ZNF571Q7Z3V5 609 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 VPS33BQ9H267 617 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 SLC24A3Q9HC58 644 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 SYN1P17600 705 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 PTPN3P26045 913 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 CSNK2BP67870 215 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 SRSF11Q05519 484 aaKnown RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 ARMC12Q5T9G4 340 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 EFL1Q7Z2Z2 1120 aaKnown RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 SAE1Q9UBE0 346 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 ZW10O43264 779 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 VAC14Q08AM6 782 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 TMPRSS4Q9NRS4 437 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 DCDC2Q9UHG0 476 aa20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 CAB39Q9Y376 341 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-201ENST00000361246 OPLAHO14841 1288 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 UBTFL6P0CB48 400 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 GPR1P46091 355 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 NOGQ13253 232 aa20.74■□□□□ 0.91
CDC42BPB-201ENST00000361246 AP1ARQ63HQ0 302 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms