RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 FAM160B1Q5W0V3 765 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 METTL7BQ6UX53 244 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 ZNF365Q70YC5 407 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 TAX1BP1Q86VP1 789 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 SEPT1Q8WYJ6 367 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 AHCYL2Q96HN2 611 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 FAM118BQ9BPY3 351 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 FOXP3Q9BZS1 431 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 ZNF518BQ9C0D4 1074 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 CTNNAL1Q9UBT7 734 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 CPSF3Q9UKF6 684 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 PCDHGB6Q9Y5F9 930 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 PTPRFP10586 1907 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 GOLGA6L7A0A1B0GV03 622 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 TMEM120BA0PK00 339 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 CCT8L1PA6NM43 557 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 OAS1P00973 400 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 ASLP04424 464 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 CETPP11597 493 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 PROZP22891 400 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 MYL6P60660 151 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 SGSM1Q2NKQ1 1148 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 IZUMO3Q5VZ72 239 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 ZCCHC9Q8N567 271 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 NIPA2Q8N8Q9 360 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 RBM41Q96IZ5 413 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 IMPG2Q9BZV3 1241 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 MTMR12Q9C0I1 747 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 CISHQ9NSE2 258 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 DNAJC17Q9NVM6 304 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 GGA3Q9NZ52 723 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 GPRC5DQ9NZD1 345 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 ADAM30Q9UKF2 790 aa7.64□□□□□ -1.19
CLCN3-202ENST00000360642 DRG1Q9Y295 367 aaKnown RBP7.64□□□□□ -1.19
CLCN3-202ENST00000360642 VGLL3A8MV65 326 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 F8VP50 259 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 H0YHG0 523 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 OGTO15294 1046 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ABHD2P08910 425 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 HOXC6P09630 235 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 KRT10P13645 584 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ATP2A2P16615 1042 aaKnown RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 VPS41P49754 854 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 LAMTOR4Q0VGL1 99 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 BROXQ5VW32 411 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ICE2Q659A1 982 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 MFSD7Q6UXD7 560 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PRUNE1Q86TP1 453 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ARHGEF39Q8N4T4 335 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ANKS4BQ8N8V4 417 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 GLIS1Q8NBF1 620 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 CCHCR1Q8TD31 782 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 XYLT2Q9H1B5 865 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 NKX2-4Q9H2Z4 354 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 DNPEPQ9ULA0 475 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PAPPA2Q9BXP8 1791 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 GAS2O43903 313 aaKnown RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 TJP3O95049 919 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PRAMEF1O95521 474 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ASGR2P07307 311 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 HARSP12081 509 aaKnown RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 TAP1Q03518 808 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 XRCC4Q13426 336 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PRKG1Q13976 671 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 VGLL4Q14135 290 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 MXD4Q14582 209 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ACAP2Q15057 778 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 SURF1Q15526 300 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 OASLQ15646 514 aaKnown RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 LY6KQ17RY6 165 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 P3H1Q32P28 736 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 TMEM63BQ5T3F8 832 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 CPZQ66K79 652 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 SPOCD1Q6ZMY3 1216 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ALLCQ8N6M5 410 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 TFAP2BQ92481 460 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 FAM167AQ96KS9 214 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 MCEEQ96PE7 176 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 SPATC1LQ9H0A9 340 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 KLHL11Q9NVR0 708 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 NAALADL1Q9UQQ1 740 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PCDHB12Q9Y5F1 795 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 hCG_1818297A0A087WSY0 165 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 C3orf70A6NLC5 250 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 FOXO6A8MYZ6 492 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 DNALI1O14645 258 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 SNX3O60493 162 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ARIH2O95376 493 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 EPXP11678 715 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ALAS2P22557 587 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PTX3P26022 381 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 IFNAR2P48551 515 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 ERVK-21P61565 698 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 PIGHQ14442 188 aaPredicted RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 SUZ12Q15022 739 aaKnown RBP7.63□□□□□ -1.19
CLCN3-202ENST00000360642 TXNRD3NBQ6F5E7 133 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 GPAT2Q6NUI2 795 aa7.63□□□□□ -1.19
CLCN3-202ENST00000360642 CHSY3Q70JA7 882 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms