RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 BEST1O76090 585 aa27.16■■□□□ 1.94
CUEDC1-201ENST00000360238 MAP2K2P36507 400 aa27.16■■□□□ 1.94
CUEDC1-201ENST00000360238 DPYSQ14117 519 aa27.16■■□□□ 1.94
CUEDC1-201ENST00000360238 ARMC2Q8NEN0 867 aa27.16■■□□□ 1.94
CUEDC1-201ENST00000360238 SLC9A7Q96T83 725 aa27.16■■□□□ 1.94
CUEDC1-201ENST00000360238 NAT9Q9BTE0 207 aa27.16■■□□□ 1.94
CUEDC1-201ENST00000360238 WDR27A2RRH5 827 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 FBXO21O94952 628 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 ACAT1P24752 427 aaKnown RBP27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 NIPAL4Q0D2K0 466 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 AP1B1Q10567 949 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 DBN1Q16643 649 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 MROH9Q5TGP6 573 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 WSCD1Q658N2 575 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 FAM91A1Q658Y4 838 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 LONP2Q86WA8 852 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 NDUFAF2Q8N183 169 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 E2F7Q96AV8 911 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 SLC13A1Q9BZW2 595 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 Q9Y3F1 56 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 BIRC5O15392 142 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 FAM200BP0CF97 657 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 GNAT1P11488 350 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 PGAM1P18669 254 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 SERPINB3P29508 390 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 DEUP1Q05D60 604 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 PDCD7Q8N8D1 485 aaKnown RBP27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 FAM13CQ8NE31 585 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 CDKL2Q92772 493 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 C15orf41Q9Y2V0 281 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 NR2E3Q9Y5X4 410 aa27.15■■□□□ 1.94
CUEDC1-201ENST00000360238 ANP32DO95626 131 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 CDK18Q07002 472 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 BST1Q10588 318 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 MDH1BQ5I0G3 518 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 RFX8Q6ZV50 586 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 ACMSDQ8TDX5 336 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 NTAN1Q96AB6 310 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 PTCD3Q96EY7 689 aaKnown RBP27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 MED10Q9BTT4 135 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 MECRQ9BV79 373 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 AP5M1Q9H0R1 490 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 YY1AP1Q9H869 796 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 KRT82Q9NSB4 513 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 KCNK4Q9NYG8 393 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 IGSF9Q9P2J2 1179 aa27.14■■□□□ 1.94
CUEDC1-201ENST00000360238 EEF2KO00418 725 aaKnown RBP27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 EPHB2P29323 1055 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 TKTL1P51854 596 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 TMPRSS15P98073 1019 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 ZBTB16Q05516 673 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 KRT72Q14CN4 511 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 TEX44Q53QW1 395 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 STXBP5Q5T5C0 1151 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 CASC4Q6P4E1 433 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 PIGVQ9NUD9 493 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 SLC38A7Q9NVC3 462 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 CPA4Q9UI42 421 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 RAD54BQ9Y620 910 aa27.14■■□□□ 1.93
CUEDC1-201ENST00000360238 DCLK1O15075 740 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 CREB3O43889 395 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 CCDC22O60826 627 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 MYL2P10916 166 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 NDUFV1P49821 464 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 OCRLQ01968 901 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 ACCSLQ4AC99 568 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 SYPL2Q5VXT5 272 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 NUDCD3Q8IVD9 361 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 DDX51Q8N8A6 666 aaKnown RBP eCLIP27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 PRDM12Q9H4Q4 367 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 TMPRSS4Q9NRS4 437 aa27.13■■□□□ 1.93
CUEDC1-201ENST00000360238 SYNJ2BP-COX16A0A087WUM0 186 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 WASHC5Q12768 1159 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 SCAPQ12770 1279 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 WASHC2DQ5SRD0 308 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 KYAT3Q6YP21 454 aaKnown RBP27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 STKLD1Q8NE28 680 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 ZFP42Q96MM3 310 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 COX16Q9P0S2 106 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 TRPM7Q96QT4 1865 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 C9IYK1 514 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 BPGMP07738 259 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 PSMB4P28070 264 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 GJA9P57773 515 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 BEX3Q00994 111 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 NME3Q13232 169 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 CRYMQ14894 314 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 CHI3L2Q15782 390 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 TMEM86AQ8N2M4 240 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 C2orf69Q8N8R5 385 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 ARNTL2Q8WYA1 636 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 FBXO6Q9NRD1 293 aaPredicted RBP27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 ARL8BQ9NVJ2 186 aa27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 DDX43Q9NXZ2 648 aaKnown RBP27.12■■□□□ 1.93
CUEDC1-201ENST00000360238 MGAT1P26572 445 aa27.11■■□□□ 1.93
CUEDC1-201ENST00000360238 MAP3K7CLP57077 242 aa27.11■■□□□ 1.93
CUEDC1-201ENST00000360238 KIAA0319Q5VV43 1072 aa27.11■■□□□ 1.93
CUEDC1-201ENST00000360238 TAF2Q6P1X5 1199 aa27.11■■□□□ 1.93
CUEDC1-201ENST00000360238 TLDC1Q6P9B6 456 aa27.11■■□□□ 1.93
CUEDC1-201ENST00000360238 HFE2Q6ZVN8 426 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms