RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PCED1BQ96HM7 432 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 ACBD6Q9BR61 282 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 NLRC5Q86WI3 1866 aa14.34□□□□□ -0.11
CSNK1E-201ENST00000359867 ARHGEF37A1IGU5 675 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 MCF2LO15068 1137 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 OAZ2O95190 189 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 PYGLP06737 847 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 STIP1P31948 543 aaKnown RBP14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 CTNNB1P35222 781 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 NOMO1Q15155 1222 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 CTXN3Q4LDR2 81 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 RAB6CQ53S08 254 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 RNF168Q8IYW5 571 aaPredicted RBP14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 GLIS1Q8NBF1 620 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 CLEC4CQ8WTT0 213 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 RSAD2Q8WXG1 361 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 ZNF670Q9BS34 389 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 SNRNP25Q9BV90 132 aaKnown RBP14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 RAB6CQ9H0N0 254 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 STMN4Q9H169 189 aaPredicted RBP14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 PCDH18Q9HCL0 1135 aa14.33□□□□□ -0.11
CSNK1E-201ENST00000359867 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 SMAPO00193 183 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 ACSL3O95573 720 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 FAM200BP0CF97 657 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 EZRP15311 586 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 TGM2P21980 687 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 MATKP42679 507 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 ADCY1Q08828 1119 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 USP41Q3LFD5 358 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 KIAA1841Q6NSI8 718 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 ANKS4BQ8N8V4 417 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 P3H4Q92791 437 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 MYLPFQ96A32 169 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 FAF2Q96CS3 445 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 MED10Q9BTT4 135 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 ALG13Q9NP73 1137 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 SAMD15Q9P1V8 674 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 SAE1Q9UBE0 346 aaPredicted RBP14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 SHOC2Q9UQ13 582 aa14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 YBX2Q9Y2T7 364 aaKnown RBP14.33□□□□□ -0.12
CSNK1E-201ENST00000359867 DAB1O75553 588 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 DNAJC8O75937 253 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 FBXO21O94952 628 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 SOD2P04179 222 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ZSCAN5DPP0CG00 497 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 IL4RP24394 825 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 MRPS5P82675 430 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 MMRN1Q13201 1228 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 AUHQ13825 339 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 MRPL58Q14197 206 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 SLC39A12Q504Y0 691 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 RNASEH2BQ5TBB1 312 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ZNF280DQ6N043 979 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 CLEC20AQ6ZU45 233 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 VPS52Q8N1B4 723 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 CENPTQ96BT3 561 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PGLYRP2Q96PD5 576 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PHACTR1Q9C0D0 580 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 TMEM30AQ9NV96 361 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 CTNNAL1Q9UBT7 734 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 RASGRF2O14827 1237 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ADAM12O43184 909 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ATP6V1G2O95670 118 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 AGTP01019 485 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 RBP3P10745 1247 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ETS1P14921 441 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PPM1AP35813 382 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 CACNA2D1P54289 1103 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 TSPY1Q01534 308 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ADIGQ0VDE8 80 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 DPYSL2Q16555 572 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 SLC25A52Q3SY17 297 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 TRIM74Q86UV6 250 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 TRIM73Q86UV7 250 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PSTKQ8IV42 348 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 ANKRD42Q8N9B4 389 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 DYDC1Q8WWB3 177 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PKMYT1Q99640 499 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 CERS4Q9HA82 394 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 NOD2Q9HC29 1040 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 MYO7AQ13402 2215 aa14.32□□□□□ -0.12
CSNK1E-201ENST00000359867 APOL1O14791 398 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 COQ9O75208 318 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 TCEA3O75764 348 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 BEST1O76090 585 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 IFNB1P01574 187 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 NOS2P35228 1153 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 YWHAZP63104 245 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 C1QTNF12Q5T7M4 302 aa14.31□□□□□ -0.12
CSNK1E-201ENST00000359867 CCDC63Q8NA47 563 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms