RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 HEPACAM2A8MVW5 462 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 C2CD4DB7Z1M9 353 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 ACSL4O60488 711 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 PAGE1O75459 146 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 ECI2O75521 394 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 FTCDO95954 541 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 KRT7P08729 469 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 RARAP10276 462 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 CTNNA2P26232 953 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 SLC11A2P49281 568 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 MLLT6P55198 1093 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 ZNF569Q5MCW4 686 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 ACBD5Q5T8D3 534 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 PARM1Q6UWI2 310 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 DENND1CQ8IV53 801 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 RHOT1Q8IXI2 618 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 BPIFB1Q8TDL5 484 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 FGF14Q92915 247 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 MAGEB5Q9BZ81 275 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
NIF3L1-201ENST00000359683 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 GPR37L1O60883 481 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 MOCS2O96007 188 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 CTNNA1P35221 906 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 PEX5P50542 639 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 HTR4Q13639 388 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ATP13A4Q4VNC1 1196 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 MS4A13Q5J8X5 152 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 KCNT1Q5JUK3 1230 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ADGRF1Q5T601 910 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 MEI1Q5TIA1 1274 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 PIK3R6Q5UE93 754 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 NADSYN1Q6IA69 706 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 VITQ6UXI7 678 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 MFSD6LQ8IWD5 586 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 BBS7Q8IWZ6 715 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM217AQ8IXS0 508 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 SLC35F6Q8N357 371 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 HES6Q96HZ4 224 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 PLA2G2FQ9BZM2 168 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ZWILCHQ9H900 591 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 TBC1D14Q9P2M4 693 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 HS3ST4Q9Y661 456 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 CCDC66A2RUB6 948 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 MIF4GDA9UHW6 222 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 GFRA2O00451 464 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 SP100P23497 879 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 L1CAMP32004 1257 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ARSEP51690 589 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 GNG11P61952 73 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 NRG1Q02297 640 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ZP2Q05996 745 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 SEMA3BQ13214 749 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 DPYSL2Q16555 572 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 CA9Q16790 459 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 SMTNL2Q2TAL5 461 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM133BQ5BKY9 247 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 EFHC2Q5JST6 749 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ARTNQ5T4W7 220 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 CPXM2Q8N436 756 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 ST13P5Q8NFI4 369 aaPredicted RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 KRT35Q92764 455 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 NXPE3Q969Y0 559 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 OTUB2Q96DC9 234 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 RPP25Q9BUL9 199 aaKnown RBP12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 GPATCH2LQ9NWQ4 482 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 JRKLQ9Y4A0 524 aa12.84□□□□□ -0.35
NIF3L1-201ENST00000359683 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 LOC730098B7Z3J9 87 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 SLC9A3R1O14745 358 aaPredicted RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 DDX3YO15523 660 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 TNNT1P13805 278 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 PSMC3P17980 439 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 SLC6A4P31645 630 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 C5orf22Q49AR2 442 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 KATNAL2Q8IYT4 538 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 ADGRG2Q8IZP9 1017 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 PYROXD2Q8N2H3 581 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 OSCP1Q8WVF1 389 aa12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 DDX50Q9BQ39 737 aaKnown RBP12.83□□□□□ -0.36
NIF3L1-201ENST00000359683 KXD1Q9BQD3 176 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms