RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SEC24DO94855 1032 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CST5P28325 142 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 PRDX6P30041 224 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 NDST2P52849 883 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 TPTEP56180 551 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 OXA1LQ15070 435 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 LSM12Q3MHD2 195 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 OGFRL1Q5TC84 451 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 TRABD2AQ86V40 505 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 ALYREFQ86V81 257 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 FAM160B2Q86V87 743 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 BRSK2Q8IWQ3 736 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 ISOC1Q96CN7 298 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 TRIM9Q9C026 710 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 UPF3AQ9H1J1 476 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 OSGEPQ9NPF4 335 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 COMMD8Q9NX08 183 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 PARP2Q9UGN5 583 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CAPN14A8MX76 684 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CDH16O75309 829 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 FAM58BPP0C7Q3 252 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CCDC130P13994 396 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 RAG1P15918 1043 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CTRB1P17538 263 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 ANXA13P27216 316 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 RPA1P27694 616 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 KCNJ1P48048 391 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CDKL1Q00532 357 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 EPHA7Q15375 998 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 STILQ15468 1287 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 C6orf52Q5T4I8 152 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 CTRB2Q6GPI1 263 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 MAMDC4Q6UXC1 1216 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 SLC51BQ86UW2 128 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 HEATR4Q86WZ0 1026 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 RIOX2Q8IUF8 465 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 HACE1Q8IYU2 909 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 KIAA0895Q8NCT3 520 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 ZNF577Q9BSK1 485 aa9.59□□□□□ -0.87
SMARCAL1-202ENST00000358207 H3BUI4 141 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 hCG_1984214I3L0E3 225 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 SREBF1P36956 1147 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLC1A1P43005 524 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 ALDH1A3P47895 512 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 ARL4CP56559 192 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 KDSRQ06136 332 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 BNIP3Q12983 259 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRIM16LQ309B1 348 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 ARHGEF16Q5VV41 709 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 KYAT3Q6YP21 454 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 SV2BQ7L1I2 683 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 GPBP1Q86WP2 473 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 HIPK4Q8NE63 616 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 C7orf57Q8NEG2 295 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 TSPAN14Q8NG11 270 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 SYTL5Q8TDW5 730 aaPredicted RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 THAP11Q96EK4 314 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 SNF8Q96H20 258 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 CDHR1Q96JP9 859 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 DHRS9Q9BPW9 319 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 LSM14BQ9BX40 385 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 ADAM33Q9BZ11 813 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 HOXD1Q9GZZ0 328 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 C12orf65Q9H3J6 166 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 NINJ2Q9NZG7 142 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 WRAP73Q9P2S5 460 aaPredicted RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 DNMT3BQ9UBC3 853 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 PCYOX1Q9UHG3 505 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 AMFRQ9UKV5 643 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 CDH7Q9ULB5 785 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 PADI4Q9UM07 663 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 CDC14AQ9UNH5 594 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 JAK1P23458 1154 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 GCAP28676 217 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 MRPS9P82933 396 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 CACNB2Q08289 660 aaPredicted RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 COG2Q14746 738 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 CEP55Q53EZ4 464 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 FAM182AQ5T1J6 154 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 PPP1R18Q6NYC8 613 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 ALKBH5Q6P6C2 394 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 RHBDF2Q6PJF5 856 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 CCDC137Q6PK04 289 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 IRF2BP2Q7Z5L9 587 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRIML2Q8N7C3 387 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 ETNPPLQ8TBG4 499 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 PPP1R13LQ8WUF5 828 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 TP53INP1Q96A56 240 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 OLFM1Q99784 485 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 SLC29A1Q99808 456 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 TRIM55Q9BYV6 548 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 DCLK3Q9C098 648 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 C12orf10Q9HB07 376 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 KCNH7Q9NS40 1196 aa9.58□□□□□ -0.88
SMARCAL1-202ENST00000358207 KBTBD4Q9NVX7 518 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms