RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GARSP41250 739 aaKnown RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 MED21Q13503 144 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 PDE1CQ14123 709 aaPredicted RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 GRM2Q14416 872 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 PCLAFQ15004 111 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 GOLGA7BQ2TAP0 167 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 CELF3Q5SZQ8 465 aaKnown RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 METTL21CQ5VZV1 264 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 ZCCHC23Q6ZST2 131 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 RASSF3Q86WH2 238 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 GSTCDQ8NEC7 633 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 SPATA13Q96N96 652 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 BTBD9Q96Q07 612 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 C11orf84Q9BUA3 381 aaPredicted RBP18.23■□□□□ 0.51
RTN4-204ENST00000357732 SMARCAD1Q9H4L7 1026 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 GPATCH2LQ9NWQ4 482 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 ETAA1Q9NY74 926 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 NDUFA13Q9P0J0 144 aa18.23■□□□□ 0.51
RTN4-204ENST00000357732 WDR90Q96KV7 1748 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 STK10O94804 968 aaKnown RBP18.22■□□□□ 0.51
RTN4-204ENST00000357732 CYP2C8P10632 490 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 UQCRBP14927 111 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 PDE1BQ01064 536 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 CA9Q16790 459 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 LIN52Q52LA3 116 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 DPY19L2Q6NUT2 758 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 POTEAQ6S8J7 498 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 TRPM4Q8TD43 1214 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 KHSRPQ92945 711 aaKnown RBP eCLIP18.22■□□□□ 0.513e-8■■□□□ 11.5
RTN4-204ENST00000357732 ISL2Q96A47 359 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 TUBGCP5Q96RT8 1024 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 LBHD1Q9BQE6 289 aaPredicted RBP18.22■□□□□ 0.51
RTN4-204ENST00000357732 SPATA16Q9BXB7 569 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 XPNPEP3Q9NQH7 507 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 HESX1Q9UBX0 185 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 CDH22Q9UJ99 828 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 ADAM28Q9UKQ2 775 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 TPP1O14773 563 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 ARIH2O95376 493 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 PROCP04070 461 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 IDH3AP50213 366 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 POLE2P56282 527 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 PPP6R3Q5H9R7 873 aaPredicted RBP18.22■□□□□ 0.51
RTN4-204ENST00000357732 KCNT2Q6UVM3 1135 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 NME8Q8N427 588 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 SLC35F5Q8WV83 523 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 TFB1MQ8WVM0 346 aaKnown RBP18.22■□□□□ 0.51
RTN4-204ENST00000357732 TRAPPC12Q8WVT3 735 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 HTR3CQ8WXA8 447 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 DTNBP1Q96EV8 351 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 COPG2Q9UBF2 871 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 CDY2AQ9Y6F7 541 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 CDY1Q9Y6F8 540 aa18.22■□□□□ 0.51
RTN4-204ENST00000357732 ITM2AO43736 263 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 AP1G1O43747 822 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 OPHN1O60890 802 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 GRAP2O75791 330 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 RPL10AP62906 217 aaKnown RBP18.21■□□□□ 0.51
RTN4-204ENST00000357732 SLC25A3Q00325 362 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 HSDL1Q3SXM5 330 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 FAM182AQ5T1J6 154 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 PDPK2PQ6A1A2 396 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 EFCAB12Q6NXP0 572 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 PSTKQ8IV42 348 aaKnown RBP18.21■□□□□ 0.51
RTN4-204ENST00000357732 KCNK16Q96T55 309 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 SORT1Q99523 831 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 R3HDMLQ9H3Y0 253 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 COMMD3-BMI1R4GMX3 469 aa18.21■□□□□ 0.51
RTN4-204ENST00000357732 SF3B1O75533 1304 aaKnown RBP eCLIP18.2■□□□□ 0.52e-6■■■■■ 75.3
RTN4-204ENST00000357732 H2AFYO75367 372 aaKnown RBP18.2■□□□□ 0.5
RTN4-204ENST00000357732 DGKIO75912 1065 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 ITGA2BP08514 1039 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 ABCE1P61221 599 aaKnown RBP18.2■□□□□ 0.5
RTN4-204ENST00000357732 GBE1Q04446 702 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 FRG1Q14331 258 aaKnown RBP18.2■□□□□ 0.5
RTN4-204ENST00000357732 SLC10A6Q3KNW5 377 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 PMF1Q6P1K2 205 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 RAPH1Q70E73 1250 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 SLC26A9Q7LBE3 791 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 TMEM126BQ8IUX1 230 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 SREK1Q8WXA9 508 aaKnown RBP18.2■□□□□ 0.5
RTN4-204ENST00000357732 STON2Q8WXE9 905 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 EPB41L1Q9H4G0 881 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 MINDY3Q9H8M7 445 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 ARHGAP26Q9UNA1 814 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 ZNF195O14628 629 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 PABPC4LP0CB38 370 aaKnown RBP18.2■□□□□ 0.5
RTN4-204ENST00000357732 GSTT1P30711 240 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 HK2P52789 917 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 SLC10A2Q12908 348 aaPredicted RBP18.2■□□□□ 0.5
RTN4-204ENST00000357732 CCNIQ14094 377 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 GRTP1Q5TC63 336 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 RASIP1Q5U651 963 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 DPH6Q7L8W6 267 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 CSPG4P5Q96PW8 444 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 CPNE1Q99829 537 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 PDZD7Q9H5P4 517 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 DPP3Q9NY33 737 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 GGA3Q9NZ52 723 aa18.2■□□□□ 0.5
RTN4-204ENST00000357732 AP4E1Q9UPM8 1137 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms