RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 HES6Q96HZ4 224 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ZFYVE19Q96K21 471 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 KCTD15Q96SI1 283 aaPredicted RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 PRMT1Q99873 361 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 NCAPGQ9BPX3 1015 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 LINC00597Q9H2U6 94 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 DHX35Q9H5Z1 703 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 KIF9Q9HAQ2 790 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 THEGQ9P2T0 379 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 MYOFQ9NZM1 2061 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 E2F8A0AVK6 867 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ACSL4O60488 711 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 CD48P09326 243 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 HTR4Q13639 388 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 GRM2Q14416 872 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ARL13BQ3SXY8 428 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 RFWD3Q6PCD5 774 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 BPIFB1Q8TDL5 484 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 RAPGEF5Q92565 580 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 C16orf45Q96MC5 204 aaPredicted RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 LSM7Q9UK45 103 aaKnown RBP26.29■■□□□ 1.8
SSBP3-202ENST00000357475 NUMBLQ9Y6R0 609 aa26.29■■□□□ 1.8
SSBP3-202ENST00000357475 ANHXE9PGG2 379 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 PI4K2BG5E9Z4 385 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 CTNNA2P26232 953 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 PEX5P50542 639 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 BOLA3Q53S33 107 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 EFHC2Q5JST6 749 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 POLNQ7Z5Q5 900 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 ANKS1BQ7Z6G8 1248 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 TEKT4Q8WW24 435 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 ELSPBP1Q96BH3 223 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 HAPLN3Q96S86 360 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 TLR10Q9BXR5 811 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 DCLK3Q9C098 648 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 PCDHA3Q9Y5H8 950 aa26.28■■□□□ 1.8
SSBP3-202ENST00000357475 PSTPIP1O43586 416 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 L1CAMP32004 1257 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 SLC11A2P49281 568 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 IRAK1P51617 712 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 SGSHP51688 502 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 ARSEP51690 589 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 LRRC38Q5VT99 294 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 TRIM68Q6AZZ1 485 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 LIMD1Q9UGP4 676 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 SLC12A6Q9UHW9 1150 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 STOML2Q9UJZ1 356 aa26.27■■□□□ 1.8
SSBP3-202ENST00000357475 ATP1A1P05023 1023 aaKnown RBP26.26■■□□□ 1.79
SSBP3-202ENST00000357475 KRT7P08729 469 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 MLLT6P55198 1093 aaPredicted RBP26.26■■□□□ 1.79
SSBP3-202ENST00000357475 AUHQ13825 339 aaKnown RBP26.26■■□□□ 1.79
SSBP3-202ENST00000357475 PUS10Q3MIT2 529 aaKnown RBP26.26■■□□□ 1.79
SSBP3-202ENST00000357475 PPP6R3Q5H9R7 873 aaPredicted RBP26.26■■□□□ 1.79
SSBP3-202ENST00000357475 ADGRF1Q5T601 910 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 DCAF12L1Q5VU92 463 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 AADACL2Q6P093 401 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 CHSY1Q86X52 802 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 ZNF683Q8IZ20 524 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 AZIN2Q96A70 460 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 PRICKLE1Q96MT3 831 aaPredicted RBP26.26■■□□□ 1.79
SSBP3-202ENST00000357475 OBP2AQ9NY56 170 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 OR12D3Q9UGF7 316 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 VANGL2Q9ULK5 521 aa26.26■■□□□ 1.79
SSBP3-202ENST00000357475 DOCK4Q8N1I0 1966 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 TCF20Q9UGU0 1960 aaKnown RBP26.25■■□□□ 1.79
SSBP3-202ENST00000357475 TSPAN3O60637 253 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 KRT1P04264 644 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 TACR2P21452 398 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 AIF1P55008 147 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 MMRN1Q13201 1228 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 SEMA3BQ13214 749 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 ZFYVE27Q5T4F4 411 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 FAM217AQ8IXS0 508 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 IGSF8Q969P0 613 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 PSMB7Q99436 277 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 OSBPL2Q9H1P3 480 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 PCDH18Q9HCL0 1135 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 NEU3Q9UQ49 428 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 NR2E1Q9Y466 385 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 MYO10Q9HD67 2058 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 COL4A3Q01955 1670 aa26.25■■□□□ 1.79
SSBP3-202ENST00000357475 C3orf70A6NLC5 250 aaPredicted RBP26.24■■□□□ 1.79
SSBP3-202ENST00000357475 ECI2O75521 394 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 CDH6P55285 790 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 LLGL1Q15334 1064 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 DPYSL2Q16555 572 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 FBXL22Q6P050 247 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 MFSD6LQ8IWD5 586 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 RNF25Q96BH1 459 aaPredicted RBP26.24■■□□□ 1.79
SSBP3-202ENST00000357475 TMEM51Q9NW97 253 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 CCDC66A2RUB6 948 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 GFRA2O00451 464 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 CREB3O43889 395 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 SRGAP2O75044 1071 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 LRIG2O94898 1065 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 LATS1O95835 1130 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 ASGR2P07307 311 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 ARSAP15289 507 aa26.24■■□□□ 1.79
SSBP3-202ENST00000357475 MSNP26038 577 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms