RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ZNF132P52740 706 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 AQP4P55087 323 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 FSTL1Q12841 308 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PRKG1Q13976 671 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 SUPT20HL1Q3ZLR7 823 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNF280DQ6N043 979 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 NEPROQ6NW34 567 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ABHD15Q6UXT9 468 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PACS1Q6VY07 963 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 GET4Q7L5D6 327 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 HPS6Q86YV9 775 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 DEFB107AQ8IZN7 70 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 CGREF1Q99674 301 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PDLIM7Q9NR12 457 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 DMTF1Q9Y222 760 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TTLL3Q9Y4R7 772 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 F8W8V4 182 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 RFPL1O75677 317 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TRUB2O95900 331 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PIM1P11309 404 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 UQCRBP14927 111 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 VCLP18206 1134 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 SESN2P58004 480 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 DMPKQ09013 629 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 PDK3Q15120 406 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 SFT2D3Q587I9 215 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNF667Q5HYK9 610 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TMEM214Q6NUQ4 689 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 UNC5AQ6ZN44 842 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 XYLT1Q86Y38 959 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 BRSK2Q8IWQ3 736 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ALDH16A1Q8IZ83 802 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZFP28Q8NHY6 868 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 GDPD5Q8WTR4 605 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 RXFP2Q8WXD0 754 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 LPAR1Q92633 364 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 BHMTQ93088 406 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 C7orf26Q96N11 449 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 GCNAQ96QF7 691 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 TWNKQ96RR1 684 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 CEP41Q9BYV8 373 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNF518BQ9C0D4 1074 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 ASNSD1Q9NWL6 643 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 THEGQ9P2T0 379 aa8.48□□□□□ -1.05
CDC42SE1-201ENST00000357235 MED7O43513 233 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 DCXO43602 365 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 APOEP02649 317 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ATP6V1B1P15313 513 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PCSK6P29122 969 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PTPN7P35236 360 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 COPAP53621 1224 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 HMGCS2P54868 508 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 DLG1Q12959 904 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 CAMK2BQ13554 666 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 KCNJ11Q14654 390 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 NADK2Q4G0N4 442 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 N4BP2L1Q5TBK1 243 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 CES3Q6UWW8 571 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 SH2D5Q6ZV89 423 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 DHDDSQ86SQ9 333 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 WDR49Q8IV35 697 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 NIPA2Q8N8Q9 360 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 RDM1Q8NG50 284 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP4R1Q8TF05 950 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 AKT1S1Q96B36 256 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PGBD4Q96DM1 585 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ANKRD36BP1Q96IX9 119 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 COX4I2Q96KJ9 171 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 CCT7Q99832 543 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 HEPHQ9BQS7 1158 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 TPK1Q9H3S4 243 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PLGRKTQ9HBL7 147 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PNPOQ9NVS9 261 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PAK5Q9P286 719 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 DNAJB4Q9UDY4 337 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 CNTN6Q9UQ52 1028 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 CCDC162PA2VCL2 907 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 WNT10BO00744 389 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 KLHL41O60662 606 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 TFAP2AP05549 437 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 BPGMP07738 259 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 SERPINA6P08185 405 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 CXCL8P10145 99 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 RAG1P15918 1043 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ASPAP45381 313 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZBTB17Q13105 803 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 SEPT6Q14141 434 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 TFDP2Q14188 446 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 C16orf72Q14CZ0 275 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 NOMO1Q15155 1222 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 MAP3K21Q5TCX8 1036 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 ANGEL2Q5VTE6 544 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 C14orf80Q86SX3 495 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PDSS2Q86YH6 399 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 TMEM192Q8IY95 271 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 RNF148Q8N7C7 305 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PIWIL2Q8TC59 973 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PGLYRP2Q96PD5 576 aa8.47□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP1R10Q96QC0 940 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms