RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ST3GAL5Q9UNP4 418 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 USP17L3A6NCW0 530 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 USP17L4A6NCW7 530 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SLC22A1O15245 554 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SIN3BO75182 1162 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MED24O75448 989 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MAPK8P45983 427 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 TNK2Q07912 1038 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 C16orf72Q14CZ0 275 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SPANXN3Q5MJ09 141 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 FAM43BQ6ZT52 329 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 USP17L1Q7RTZ2 530 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PROCA1Q8NCQ7 364 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 EXOSC4Q9NPD3 245 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SCAF8Q9UPN6 1271 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PCDHA3Q9Y5H8 950 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MED13LQ71F56 2210 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CST8O60676 142 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 EIF4BP23588 611 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CDC42P60953 191 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 HHIPL2Q6UWX4 724 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ABRAQ8N0Z2 381 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 KRT78Q8N1N4 520 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 TMEM132CQ8N3T6 1108 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SVOPLQ8N434 492 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 NAALADL1Q9UQQ1 740 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PCDHGA3Q9Y5H0 932 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 WWP2O00308 870 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 NCK2O43639 380 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 VEPH1Q14D04 833 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CYP51A1Q16850 503 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 AHI1Q8N157 1196 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 FBXW8Q8N3Y1 598 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SLCO2A1Q92959 643 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ASIC4Q96FT7 647 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 COX4I2Q96KJ9 171 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 POLR3FQ9H1D9 316 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ZNF302Q9NR11 478 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 LATS2Q9NRM7 1088 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 DDX43Q9NXZ2 648 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 HAO1Q9UJM8 370 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PKP3Q9Y446 797 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ASB14A6NK59 587 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MYO1GB0I1T2 1018 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MLYCDO95822 493 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 HMBSP08397 361 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SREBF1P36956 1147 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 OTUD4Q01804 1114 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PSMD5Q16401 504 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CLEC16AQ2KHT3 1053 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 USP17L2Q6R6M4 530 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SLC44A2Q8IWA5 706 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 FAR1Q8WVX9 515 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ZFYVE19Q96K21 471 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 QRFPRQ96P65 431 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 HOPXQ9BPY8 73 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ISCA1Q9BUE6 129 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PIH1D3Q9NQM4 214 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 EURLQ9NYK6 297 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 IFT80Q9P2H3 777 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MEGF6O75095 1541 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 EFCAB10A6NFE3 127 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CYP26A1O43174 497 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 IGKV5-2P06315 115 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 COL6A2P12110 1019 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SNRNP48Q6IEG0 339 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 GALNT4Q8N4A0 578 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 C6orf62Q9GZU0 229 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 GINS2Q9Y248 185 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CFL2Q9Y281 166 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CD163L1Q9NR16 1453 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 A0A087X1B8 175 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MSL3P1P0C860 447 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MLNP12872 115 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 WDR72Q3MJ13 1102 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 EPS8L3Q8TE67 593 aaKnown RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MYL12BO14950 172 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 TM7SF2O76062 418 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ZCCHC18P0CG32 403 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CYP11B2P19099 503 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CUL2Q13617 745 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 CCDC149Q6ZUS6 474 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 MAEAQ7L5Y9 396 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 LACRTQ9GZZ8 138 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 ASB7Q9H672 318 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 PRDM8Q9NQV8 689 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 IPPQ9Y573 584 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SPACA6W5XKT8 324 aa6.72□□□□□ -1.33
VPS13B-202ENST00000357162 SUPT3HB4E1H0 165 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 CCDC85BQ15834 202 aaPredicted RBP6.71□□□□□ -1.33
VPS13B-202ENST00000357162 SLC7A14Q8TBB6 771 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 A0A087X0T9 212 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 SEC24AO95486 1093 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 FAM228BP0C875 321 aa6.71□□□□□ -1.33
VPS13B-202ENST00000357162 GPD1P21695 349 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms