RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MPPE1Q53F39 396 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 RAB6CQ53S08 254 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 BOLA3Q53S33 107 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 MS4A13Q5J8X5 152 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 EFHC2Q5JST6 749 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 LY6G5CQ5SRR4 150 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 MPP7Q5T2T1 576 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 C1orf228Q6PIY5 440 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 ZNF662Q6ZS27 426 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 CHSY1Q86X52 802 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 PSTKQ8IV42 348 aaKnown RBP16.09■□□□□ 0.17
TRIM13-201ENST00000356017 ARFGAP1Q8N6T3 406 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
TRIM13-201ENST00000356017 MSANTD3Q96H12 275 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 ZNF830Q96NB3 372 aaPredicted RBP16.09■□□□□ 0.17
TRIM13-201ENST00000356017 SIK2Q9H0K1 926 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 RAB6CQ9H0N0 254 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 OSBPL2Q9H1P3 480 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
TRIM13-201ENST00000356017 MARK1Q9P0L2 795 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 XPO7Q9UIA9 1087 aaKnown RBP16.09■□□□□ 0.17
TRIM13-201ENST00000356017 HS3ST4Q9Y661 456 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 DUSP10Q9Y6W6 482 aa16.09■□□□□ 0.17
TRIM13-201ENST00000356017 ADH5P11766 374 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 TACR2P21452 398 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 ANO4Q32M45 955 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 ERMARDQ5T6L9 678 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 PIK3R6Q5UE93 754 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 NADSYN1Q6IA69 706 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 LRRC31Q6UY01 552 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 TPGS1Q6ZTW0 290 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 TMEM25Q86YD3 366 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.17
TRIM13-201ENST00000356017 CCDC185Q8N715 623 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 EXOC4Q96A65 974 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 BBS2Q9BXC9 721 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 ANLNQ9NQW6 1124 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 OR12D3Q9UGF7 316 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 FZD10Q9ULW2 581 aa16.08■□□□□ 0.17
TRIM13-201ENST00000356017 GOLGA6L7A0A1B0GV03 622 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 I6L893 689 aaPredicted RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 GFRA2O00451 464 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 HOXC11O43248 304 aaPredicted RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 ALADP13716 330 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 SLC6A4P31645 630 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 SSR1P43307 286 aaKnown RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 AUHQ13825 339 aaKnown RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 SLC44A4Q53GD3 710 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 RABGAP1LQ5R372 815 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 RAP1GAP2Q684P5 730 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 C11orf63Q6NUN7 778 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 RALGPS2Q86X27 583 aaPredicted RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 HJURPQ8NCD3 748 aaPredicted RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 TPCN2Q8NHX9 752 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 DDI1Q8WTU0 396 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 PRMT1Q99873 361 aaKnown RBP16.08■□□□□ 0.16
TRIM13-201ENST00000356017 HEBP1Q9NRV9 189 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 SALL4Q9UJQ4 1053 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 FBXL21Q9UKT6 434 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 PPP2R2CQ9Y2T4 447 aa16.08■□□□□ 0.16
TRIM13-201ENST00000356017 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 OTOL1A6NHN0 477 aaPredicted RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 TMEM110-MUSTN1A8MSY1 372 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 NEDD8-MDP1E9PL57 170 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 ZSCAN12O43309 604 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 DCXO43602 365 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 BUB1O43683 1085 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 BUB1BO60566 1050 aaPredicted RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 PENKP01210 267 aaPredicted RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 KRT7P08729 469 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 TYRP14679 529 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 GJA4P35212 333 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 VCPP55072 806 aaKnown RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 ZXDAP98168 799 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 NRG1Q02297 640 aaPredicted RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 PRKCQQ04759 706 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 FBXL22Q6P050 247 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 RFWD3Q6PCD5 774 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 DAAM2Q86T65 1068 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 LGI2Q8N0V4 545 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 SHDQ96IW2 340 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 XPO6Q96QU8 1125 aaKnown RBP16.07■□□□□ 0.16
TRIM13-201ENST00000356017 AP4E1Q9UPM8 1137 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 PIAS3Q9Y6X2 628 aa16.07■□□□□ 0.16
TRIM13-201ENST00000356017 TSPAN3O60637 253 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 EIF2DP41214 584 aaKnown RBP16.06■□□□□ 0.16
TRIM13-201ENST00000356017 ZNF135P52742 658 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-201ENST00000356017 PREPLQ4J6C6 727 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-201ENST00000356017 FYB2Q5VWT5 728 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 CCDC117Q8IWD4 279 aaPredicted RBP16.06■□□□□ 0.16
TRIM13-201ENST00000356017 SYCE1Q8N0S2 351 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 KIAA1524Q8TCG1 905 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 EDAQ92838 391 aa16.06■□□□□ 0.16
TRIM13-201ENST00000356017 RPRD1AQ96P16 312 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms