RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 KCNH4Q9UQ05 1017 aa20.15■□□□□ 0.82
COL13A1-201ENST00000354547 OTOFQ9HC10 1997 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 ALDOAP04075 364 aaKnown RBP20.14■□□□□ 0.82
COL13A1-201ENST00000354547 SETSIPP0DME0 302 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.82
COL13A1-201ENST00000354547 TPSB2P20231 275 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 PEX19P40855 299 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 MAGEA6P43360 314 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 TPSAB1Q15661 275 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 DPP9Q86TI2 863 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 SHKBP1Q8TBC3 707 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 RNF181Q9P0P0 153 aa20.14■□□□□ 0.82
COL13A1-201ENST00000354547 PIN4Q9Y237 131 aaKnown RBP20.14■□□□□ 0.82
COL13A1-201ENST00000354547 A0A0A0MRY4 1105 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SDR42E2A6NKP2 422 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 KPNA7A9QM74 516 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 STAU1O95793 577 aaKnown RBP20.14■□□□□ 0.81
COL13A1-201ENST00000354547 LMNAP02545 664 aaKnown RBP20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SMPD1P17405 629 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 ATP6V1C1P21283 382 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SEMA5AQ13591 1074 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 BLMHQ13867 455 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 PIGZQ86VD9 579 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 GPRC5AQ8NFJ5 357 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 OR6J1Q8NGC5 347 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 CFAP61Q8NHU2 1237 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SCG3Q8WXD2 468 aaKnown RBP20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SPATA13Q96N96 652 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SYBUQ9NX95 663 aa20.14■□□□□ 0.81
COL13A1-201ENST00000354547 SMNDC1O75940 238 aaKnown RBP eCLIP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 BEST1O76090 585 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 LUC7L3O95232 432 aaKnown RBP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 IGFBP6P24592 240 aaPredicted RBP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 NR2C2P49116 596 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 PDE1CQ14123 709 aaPredicted RBP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 NT5DC4Q86YG4 428 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 MOCS1Q9NZB8 636 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 TXNDC16Q9P2K2 825 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 CCDC78A2IDD5 438 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 SPECC1L-ADORA2AF8WAN1 911 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 SNAI1O95863 264 aaPredicted RBP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 DCAF4L1Q3SXM0 396 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 PACS1Q6VY07 963 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 PID1Q7Z2X4 250 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 CTU1Q7Z7A3 348 aaKnown RBP20.13■□□□□ 0.81
COL13A1-201ENST00000354547 E7ENQ6 273 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 M0QYT0 321 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 VHLP40337 213 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 SERPINB9P50453 376 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 ZNF792Q3KQV3 632 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 CMC1Q7Z7K0 106 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 LMNTD2Q8IXW0 634 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 HACE1Q8IYU2 909 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 AGR3Q8TD06 166 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 AZIN2Q96A70 460 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 PRDM12Q9H4Q4 367 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 ACSS2Q9NR19 701 aa20.13■□□□□ 0.81
COL13A1-201ENST00000354547 CAPN14A8MX76 684 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 BAG2O95816 211 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 PPP2R5DQ14738 602 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 PRAMEF19Q5SWL8 479 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 VWA5B1Q5TIE3 1220 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 SYPL2Q5VXT5 272 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 RASSF3Q86WH2 238 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 ZDHHC17Q8IUH5 632 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 APPL2Q8NEU8 664 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 UCMAQ8WVF2 138 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 CENPIQ92674 756 aaPredicted RBP20.12■□□□□ 0.81
COL13A1-201ENST00000354547 LENG1Q96BZ8 264 aaPredicted RBP20.12■□□□□ 0.81
COL13A1-201ENST00000354547 C11orf84Q9BUA3 381 aaPredicted RBP20.12■□□□□ 0.81
COL13A1-201ENST00000354547 ZFATQ9P243 1243 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 EMCNQ9ULC0 261 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 SMIM28A0A1B0GU29 152 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 C6orf222P0C671 652 aaPredicted RBP20.12■□□□□ 0.81
COL13A1-201ENST00000354547 TYK2P29597 1187 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 SOX4Q06945 474 aaPredicted RBP20.12■□□□□ 0.81
COL13A1-201ENST00000354547 ZBTB6Q15916 424 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 NOTUMQ6P988 496 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 LRRC74BQ6ZQY2 392 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 C10orf107Q8IVU9 208 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 RNF139Q8WU17 664 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 CDKL2Q92772 493 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 TTC1Q99614 292 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 YIPF3Q9GZM5 350 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 PNPOQ9NVS9 261 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 THAP1Q9NVV9 213 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 RPS6KL1Q9Y6S9 549 aa20.12■□□□□ 0.81
COL13A1-201ENST00000354547 DYNC1LI2O43237 492 aaPredicted RBP20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ADCY6O43306 1168 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 MMP3P08254 477 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 SLC1A6P48664 564 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 SLC34A1Q06495 639 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 TMPRSS6Q8IU80 811 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 SCUBE1Q8IWY4 988 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 ZNF778Q96MU6 729 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 APOL2Q9BQE5 337 aa20.11■□□□□ 0.81
COL13A1-201ENST00000354547 TAGLN3Q9UI15 199 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms