RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ADGRF2Q8IZF7 708 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 NLRP4Q96MN2 994 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 CIB1Q99828 191 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 RTKNQ9BST9 563 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 GID8Q9NWU2 228 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 FADS3Q9Y5Q0 445 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 NFASCO94856 1347 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 A0A1W2PPW3 197 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TPP1O14773 563 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 KCNQ2O43526 872 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TSHRP16473 764 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ACAT1P24752 427 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 PTGER2P43116 358 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ABCE1P61221 599 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 DMPKQ09013 629 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TRAF2Q12933 501 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 BNIP3Q12983 259 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 SEZ6Q53EL9 994 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 LRRC38Q5VT99 294 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 CYP2R1Q6VVX0 501 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UNC5AQ6ZN44 842 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 BBS12Q6ZW61 710 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UNC5BQ8IZJ1 945 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TNS4Q8IZW8 715 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 SLC7A5P1Q8MH63 180 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TTLL6Q8N841 843 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ISOC1Q96CN7 298 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 PPP1R10Q96QC0 940 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TRPC7Q9HCX4 862 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TCF7L2Q9NQB0 619 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 RNASEH2AO75792 299 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 MYCLP12524 364 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 IDO1P14902 403 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 SAT1P21673 171 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 MMP8P22894 467 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 MAP4P27816 1152 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 PIK3R1P27986 724 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 CRADDP78560 199 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 MS4A2Q01362 244 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TUBB3Q13509 450 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 EML3Q32P44 896 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 SLC9B1Q4ZJI4 515 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 PPM1JQ5JR12 505 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 IL23RQ5VWK5 629 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TMEM214Q6NUQ4 689 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ZBTB49Q6ZSB9 765 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 DEFB132Q7Z7B7 95 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 UBR7Q8N806 425 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 LRTOMTQ8WZ04 291 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF516Q92618 1163 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 ZMAT2Q96NC0 199 aaKnown RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 NDEL1Q9GZM8 345 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 DRC3Q9H069 523 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 WDR41Q9HAD4 459 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TMED5Q9Y3A6 229 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 FIS1Q9Y3D6 152 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 GPC6Q9Y625 555 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-201ENST00000352993 SBF1O95248 1867 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 PLIN4Q96Q06 1357 aa7.84□□□□□ -1.15
BRCA1-201ENST00000352993 TESPA1A2RU30 521 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NDUFB5O43674 189 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ADAM23O75077 832 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 GLRA3O75311 464 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 FUCA1P04066 466 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 FGF3P11487 239 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CD1EP15812 388 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PAX3P23760 479 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 IL1R2P27930 398 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 GABRB2P47870 512 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MTX3Q5HYI7 312 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MBLAC2Q68D91 279 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MAVSQ7Z434 540 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PCDH20Q8N6Y1 951 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF781Q8N8C0 355 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 BIRC8Q96P09 236 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 EIF2AQ9BY44 585 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 KLHL25Q9H0H3 589 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CCDC68Q9H2F9 335 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 CLK4Q9HAZ1 481 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 PNPLA3Q9NST1 481 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF358Q9NW07 568 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 IGSF9Q9P2J2 1179 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 RIMS3Q9UJD0 308 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ITGB1BP2Q9UKP3 347 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MAGED2Q9UNF1 606 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 RNF11Q9Y3C5 154 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ASTN2O75129 1339 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 SAC3D1A6NKF1 404 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 AKAP10O43572 662 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ZC3H11AO75152 810 aaKnown RBP eCLIP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 OXSR1O95747 527 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 EEF1B2P24534 225 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 GRK2P25098 689 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 SERPINB9P50453 376 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 RPS6P62753 249 aaKnown RBP7.83□□□□□ -1.16
BRCA1-201ENST00000352993 NEDD8Q15843 81 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 ZNF423Q2M1K9 1284 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 RGS21Q2M5E4 152 aa7.83□□□□□ -1.16
BRCA1-201ENST00000352993 MGAT5BQ3V5L5 792 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms