RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FNIP1Q8TF40 1166 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 LRRC45Q96CN5 670 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
CD44-205ENST00000352818 CPB2Q96IY4 423 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 SCLT1Q96NL6 688 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 HHIPQ96QV1 700 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 ZFP14Q9HCL3 533 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 ST7Q9NRC1 585 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.59□□□□□ -1.03
CD44-205ENST00000352818 TMEM74BQ9NUR3 256 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 PSD3Q9NYI0 1048 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 WDR35Q9P2L0 1181 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 IP6K2Q9UHH9 426 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 DNMT3LQ9UJW3 386 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 KIAA1257Q9ULG3 409 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 NFU1Q9UMS0 254 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 INVSQ9Y283 1065 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 UTP11Q9Y3A2 253 aaKnown RBP8.59□□□□□ -1.03
CD44-205ENST00000352818 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
CD44-205ENST00000352818 BSNQ9UPA5 3926 aa8.59□□□□□ -1.04
CD44-205ENST00000352818 WDR27A2RRH5 827 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 GOLGA6BA6NDN3 693 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 TRABD2BA6NFA1 517 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 TMEM191CA6NGB0 347 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 ZSCAN5CA6NGD5 496 aaPredicted RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 GOLGA8KD6RF30 607 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 SPECC1L-ADORA2AF8WAN1 911 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 AGPSO00116 658 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 PODXLO00592 558 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 OPA1O60313 960 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 HSF2BPO75031 334 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 XYLBO75191 536 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 MOSPD3O75425 235 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 ITGB3P05106 788 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 VDRP11473 427 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 ENGP17813 658 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 CD58P19256 250 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 POLR2BP30876 1174 aaKnown RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 HOXA11P31270 313 aaPredicted RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 CTHP32929 405 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 PTPN7P35236 360 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 OR1G1P47890 313 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 PON2Q15165 354 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 STILQ15468 1287 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 ZBTB6Q15916 424 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 DUPD1Q68J44 220 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 DNAJC24Q6P3W2 148 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 LRIG3Q6UXM1 1119 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 SCARA5Q6ZMJ2 495 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 SYDE1Q6ZW31 735 aaPredicted RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 CATSPER4Q7RTX7 472 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 MRPL10Q7Z7H8 261 aaKnown RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 JAMLQ86YT9 394 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 PASD1Q8IV76 773 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 LRRC52Q8N7C0 313 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 SLC4A11Q8NBS3 891 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
CD44-205ENST00000352818 C3orf20Q8ND61 904 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 OR2I1PQ8NGU4 316 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 TTC8Q8TAM2 541 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 TFAP2BQ92481 460 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 EXOC4Q96A65 974 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 CHFRQ96EP1 664 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 BTBD6Q96KE9 485 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 LRRC3BQ96PB8 259 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 DCBLD2Q96PD2 775 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 ERP44Q9BS26 406 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 SDCBP2Q9H190 292 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 LRRC19Q9H756 370 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 HOMER3Q9NSC5 361 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 MIOSQ9NXC5 875 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 CNTN3Q9P232 1028 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 AMACRQ9UHK6 382 aa8.58□□□□□ -1.04
CD44-205ENST00000352818 GON4LQ3T8J9 2241 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 DNHD1Q96M86 4753 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 ESYT3A0FGR9 886 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 B8ZZF3 427 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 TTI1O43156 1089 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 NPTXRO95502 500 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 SYF2O95926 243 aaKnown RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 KRT19P08727 400 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 FAM153BP0C7A2 387 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 KRT10P13645 584 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 RDXP35241 583 aaKnown RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 PTGIRP43119 386 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 GABRB2P47870 512 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 CSRP3P50461 194 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 YARSP54577 528 aaKnown RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 COPS2P61201 443 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 MRPS25P82663 173 aaKnown RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 MYO1EQ12965 1108 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 PIGHQ14442 188 aaPredicted RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 ZNF268Q14587 947 aaPredicted RBP8.57□□□□□ -1.04
CD44-205ENST00000352818 CNGA2Q16280 664 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 WDR72Q3MJ13 1102 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 FAM153CQ494X1 144 aa8.57□□□□□ -1.04
CD44-205ENST00000352818 TRIM61Q5EBN2 209 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms