RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 WDR27A2RRH5 827 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 DIAPH2O60879 1101 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 CALB2P22676 271 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 PSEN2P49810 448 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 NAB1Q13506 487 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 PAFAH1B3Q15102 231 aaKnown RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 PDK1Q15118 436 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 STXBP5Q5T5C0 1151 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 PAQR9Q6ZVX9 377 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 ENDOVQ8N8Q3 282 aaKnown RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 ARRDC4Q8NCT1 418 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 STKLD1Q8NE28 680 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 ACMSDQ8TDX5 336 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 NDRG1Q92597 394 aaKnown RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 RSRC1Q96IZ7 334 aaKnown RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 MYCBPQ99417 103 aaPredicted RBP22.8■■□□□ 1.24
UPF3A-201ENST00000351487 FERMT1Q9BQL6 677 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 BTBD10Q9BSF8 475 aa22.8■■□□□ 1.24
UPF3A-201ENST00000351487 FAM237BA0A1B0GVD1 139 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 TREHO43280 583 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 SNNO75324 88 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-201ENST00000351487 BPGMP07738 259 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 CRYBB1P53674 252 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-201ENST00000351487 DPYSQ14117 519 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 CHI3L2Q15782 390 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 CES4AQ5XG92 561 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 NUDCD3Q8IVD9 361 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 PDCD7Q8N8D1 485 aaKnown RBP22.79■■□□□ 1.24
UPF3A-201ENST00000351487 ARNTL2Q8WYA1 636 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 N4BP2L2Q92802 583 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-201ENST00000351487 PRR11Q96HE9 360 aaPredicted RBP22.79■■□□□ 1.24
UPF3A-201ENST00000351487 NAT9Q9BTE0 207 aa22.79■■□□□ 1.24
UPF3A-201ENST00000351487 DOCK3Q8IZD9 2030 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 E7ENQ6 273 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 GABRDO14764 452 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 BEST1O76090 585 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 PGAM1P18669 254 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 KYAT3Q6YP21 454 aaKnown RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 ANKRD27Q96NW4 1050 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 CADM1Q9BY67 442 aaKnown RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 GLTPD2A6NH11 291 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 CLDN5O00501 218 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 FCHO1O14526 889 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 CYB561D2O14569 222 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 PPP1R12AO14974 1030 aaPredicted RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 ZNF189O75820 626 aaPredicted RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 PTPN1P18031 435 aaKnown RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 GNAZP19086 355 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 AP1B1Q10567 949 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 PRAMEF19Q5SWL8 479 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 CLEC20AQ6ZU45 233 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 CDKL2Q92772 493 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 WNT8BQ93098 351 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 SLC9A7Q96T83 725 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 DENND2DQ9H6A0 471 aaPredicted RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 LRRC4Q9HBW1 653 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 IGSF9Q9P2J2 1179 aa22.78■■□□□ 1.24
UPF3A-201ENST00000351487 NKX1-2Q9UD57 310 aaPredicted RBP22.78■■□□□ 1.24
UPF3A-201ENST00000351487 IQCA1LA6NCM1 817 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 M0QYT0 321 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 WASHC5Q12768 1159 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 OLFML2BQ68BL8 750 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 TMPRSS4Q9NRS4 437 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 C2orf71A6NGG8 1288 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 PTGESO14684 152 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 DCLK1O15075 740 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 TPBGLP0DKB5 382 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 AIF1P55008 147 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 CRYMQ14894 314 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 CASC4Q6P4E1 433 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 PACS1Q6VY07 963 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 RFX8Q6ZV50 586 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 TTC7BQ86TV6 843 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 SIX6OS1Q8N1H7 587 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 PPP1R10Q96QC0 940 aaKnown RBP22.77■■□□□ 1.24
UPF3A-201ENST00000351487 NMUR2Q9GZQ4 415 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 PRDM12Q9H4Q4 367 aa22.77■■□□□ 1.24
UPF3A-201ENST00000351487 RPSAP08865 295 aaKnown RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 ZNF865P0CJ78 1059 aaPredicted RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 MGAT1P26572 445 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 PSMB4P28070 264 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 DEUP1Q05D60 604 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 HSF5Q4G112 596 aaPredicted RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 SYPL2Q5VXT5 272 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 C4orf50Q6ZRC1 276 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 ARID3BQ8IVW6 561 aaPredicted RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 UNC5BQ8IZJ1 945 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 NTAN1Q96AB6 310 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 NUDCD1Q96RS6 583 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 PTPN18Q99952 460 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 WWP1Q9H0M0 922 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 PIGVQ9NUD9 493 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 ALDOAP04075 364 aaKnown RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 ATP5BP06576 529 aaKnown RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 ACAT1P24752 427 aaKnown RBP22.76■■□□□ 1.23
UPF3A-201ENST00000351487 NDUFV1P49821 464 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 CRADDP78560 199 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 MORN1Q5T089 497 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 WSCD1Q658N2 575 aa22.76■■□□□ 1.23
UPF3A-201ENST00000351487 ZNF567Q8N184 647 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms