RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 LLGL1Q15334 1064 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 LONRF1Q17RB8 773 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 LRRTM3Q86VH5 581 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 CAND1Q86VP6 1230 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 ZNF473Q8WTR7 871 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 CKAP2Q8WWK9 683 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 WDR83Q9BRX9 315 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 NSRP1Q9H0G5 558 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 GPATCH2LQ9NWQ4 482 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
EPB41-203ENST00000349460 ADAM28Q9UKQ2 775 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 NEU3Q9UQ49 428 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 PCDHB7Q9Y5E2 793 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 PCDHB5Q9Y5E4 795 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 KIAA1671Q9BY89 1806 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ZWINTO95229 277 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 BRCC3P46736 316 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 VEGFBP49765 207 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 KPNA1P52294 538 aaPredicted RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 CACNA2D1P54289 1103 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 HNRNPH2P55795 449 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
EPB41-203ENST00000349460 GBE1Q04446 702 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 PPP6R3Q5H9R7 873 aaPredicted RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 ARTNQ5T4W7 220 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 STXBP5Q5T5C0 1151 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 SNX30Q5VWJ9 437 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 C6orf89Q6UWU4 347 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 TIFABQ6ZNK6 161 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 HFE2Q6ZVN8 426 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 PIGWQ7Z7B1 504 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 FAM131BQ86XD5 332 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 FBXO36Q8NEA4 188 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 SLC7A14Q8TBB6 771 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 DQX1Q8TE96 717 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 ZNF296Q8WUU4 475 aaPredicted RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 C9orf72Q96LT7 481 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 MAGEB18Q96M61 343 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 TTLL2Q9BWV7 592 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 WDCPQ9H6R7 721 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 RAB6BQ9NRW1 208 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 TMLHEQ9NVH6 421 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 TLR6Q9Y2C9 796 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 BACE2Q9Y5Z0 518 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 NBNO60934 754 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 USP17L7P0C7H9 530 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 NCAM1P13591 858 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 DRD4P21917 467 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 HPDP32754 393 aaPredicted RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 SERPINB9P50453 376 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 GPR17Q13304 367 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ANKRD20A2Q5SQ80 823 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ANKRD20A1Q5TYW2 823 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ANKRD20A3Q5VUR7 823 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ITPRIPL1Q6GPH6 555 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ZNF534Q76KX8 674 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ZC3H18Q86VM9 953 aaKnown RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 TTC17Q96AE7 1141 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 SLC39A13Q96H72 371 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 SIGLEC10Q96LC7 697 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 FAM193BQ96PV7 902 aaPredicted RBP11.09□□□□□ -0.63
EPB41-203ENST00000349460 KCNK16Q96T55 309 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 CENPHQ9H3R5 247 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 ETNK1Q9HBU6 452 aa11.09□□□□□ -0.63
EPB41-203ENST00000349460 IQANK1A0A1B0GTG1 560 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 MAGEB16A2A368 324 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 FAM47DPA6NHR8 397 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 NDUFAB1O14561 156 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 ZDHHC11BP0C7U3 371 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 AMPD1P23109 780 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 BDNFP23560 247 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 CCNCP24863 283 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 TPI1P60174 286 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 SLC18A2Q05940 514 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 RING1Q06587 406 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 UBAP2Q5T6F2 1119 aaKnown RBP11.08□□□□□ -0.64
EPB41-203ENST00000349460 PALM2Q8IXS6 379 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 DCAKDQ8WVC6 231 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 EBNA1BP2Q99848 306 aaKnown RBP11.08□□□□□ -0.64
EPB41-203ENST00000349460 CATSPERBQ9H7T0 1116 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 HEY1Q9Y5J3 304 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 FAM159BA6NKW6 160 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 TYROBPO43914 113 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 MFSD11O43934 449 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 IGFBP6P24592 240 aaPredicted RBP11.08□□□□□ -0.64
EPB41-203ENST00000349460 CCR1P32246 355 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 SLC5A3P53794 718 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
EPB41-203ENST00000349460 LGSNQ5TDP6 509 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 C3orf62Q6ZUJ4 267 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 TAC4Q86UU9 113 aa11.08□□□□□ -0.64
EPB41-203ENST00000349460 ANKS4BQ8N8V4 417 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms