RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 GSTT2BP0CG30 244 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 FGF3P11487 239 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 TMED10P49755 219 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 RPL7AP62424 266 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 BASP1P80723 227 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 MRPS22P82650 360 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 DPYSL3Q14195 570 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 KCNJ11Q14654 390 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CYTH1Q15438 398 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 HADHQ16836 314 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 FASTKD1Q53R41 847 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF362Q5T0B9 420 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 TXNRD3NBQ6F5E7 133 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 DCUN1D2Q6PH85 259 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 C16orf89Q6UX73 402 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 TAS1R3Q7RTX0 852 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 FAM83AQ86UY5 434 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 NDUFAF2Q8N183 169 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 DDHD1Q8NEL9 900 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF606Q8WXB4 792 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ISOC1Q96CN7 298 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CDHR1Q96JP9 859 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF597Q96LX8 424 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 PKP2Q99959 881 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 KIFC3Q9BVG8 833 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 OSBPL11Q9BXB4 747 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 HIPK3Q9H422 1215 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 SLC38A10Q9HBR0 1119 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 PXMP2Q9NR77 195 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 PNPLA3Q9NST1 481 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 FBXO28Q9NVF7 368 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CXorf49A8MYA2 514 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 GPR25O00155 361 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF195O14628 629 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CHADO15335 359 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 SERPINE1P05121 402 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 INHBBP09529 407 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF26P17031 533 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CCND2P30279 289 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 POLR2BP30876 1174 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 RXRGP48443 463 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 SERPINB9P50453 376 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 NDST2P52849 883 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 SLC5A3P53794 718 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 RPS3AP61247 264 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 KLF10Q13118 480 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 FLOT2Q14254 428 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CLPPQ16740 277 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZBED5Q49AG3 693 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 UNC45BQ8IWX7 931 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CTAGE3PQ8IX95 158 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CENPSQ8N2Z9 138 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 FLAD1Q8NFF5 587 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ADAMTS16Q8TE57 1224 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CASP10Q92851 521 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 PLEKHA8Q96JA3 519 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CGREF1Q99674 301 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 GPATCH1Q9BRR8 931 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 APOBEC3GQ9HC16 384 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 RBAKQ9NYW8 714 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 EPS15L1Q9UBC2 864 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 HESX1Q9UBX0 185 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF70Q9UC06 446 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 GNPTGQ9UJJ9 305 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 SLC8A2Q9UPR5 921 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 TRIM17Q9Y577 477 aa10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 GPC6Q9Y625 555 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-202ENST00000348749 CNTNAP1P78357 1384 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 TMEM150BA6NC51 233 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 F8VP50 259 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 GOLGA8TH3BQL2 631 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 LYPLA1O75608 230 aaPredicted RBP10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 STAM2O75886 525 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 CFHP08603 1231 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 TFPTP0C1Z6 253 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 CCDC130P13994 396 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 CDH3P22223 829 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 GRK2P25098 689 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 NAMPTP43490 491 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 NUMBP49757 651 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 C21orf59P57076 290 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 YWHAEP62258 255 aaKnown RBP10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 YWHAZP63104 245 aaKnown RBP10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 MTM1Q13496 603 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 CCDC153Q494R4 210 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 SPDYE2Q495Y8 402 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 PIGGQ5H8A4 983 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 FAM182BQ5T319 152 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 METTL21CQ5VZV1 264 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 ITPRIPL1Q6GPH6 555 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 C16orf46Q6P387 395 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 GPR141Q7Z602 305 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 ADGRF2Q8IZF7 708 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 PHTF2Q8N3S3 785 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 GALNT4Q8N4A0 578 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 EME1Q96AY2 570 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 ELMO3Q96BJ8 720 aa10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 C12orf43Q96C57 262 aaKnown RBP10.6□□□□□ -0.71
CHRNA1-202ENST00000348749 CFAP36Q96G28 342 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms