RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ARCQ7LC44 396 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 UNC45BQ8IWX7 931 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 USP13Q92995 863 aaPredicted RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 ECSITQ9BQ95 431 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 TBC1D23Q9NUY8 699 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 VANGL2Q9ULK5 521 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 MYH7P12883 1935 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 UBA6A0AVT1 1052 aaPredicted RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 SYCE1LA8MT33 242 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 E5RJQ4 531 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 SERPINA6P08185 405 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 FAM58BPP0C7Q3 252 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 NCAM1P13591 858 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 PTK2BQ14289 1009 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 FAM83EQ2M2I3 478 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 SPANXN3Q5MJ09 141 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 C16orf46Q6P387 395 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 SLC27A1Q6PCB7 646 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 ZDHHC17Q8IUH5 632 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 ULK2Q8IYT8 1036 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 CHKBQ9Y259 395 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 DCXO43602 365 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 CYP1A1P04798 512 aaPredicted RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 THP07101 528 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 FAM200BP0CF97 657 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 CDK7P50613 346 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 ABCE1P61221 599 aaKnown RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 BST2Q10589 180 aaKnown RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 ANO4Q32M45 955 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 RNASEH2BQ5TBB1 312 aaKnown RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 ADGRD1Q6QNK2 874 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 NR1H4Q96RI1 486 aaPredicted RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 CLUHO75153 1309 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 BIRC5O15392 142 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 UBAP2LQ14157 1087 aaKnown RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 FNBP1LQ5T0N5 605 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 MPP4Q96JB8 637 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 DENND2DQ9H6A0 471 aaPredicted RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 PIH1D1Q9NWS0 290 aaKnown RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 STX18Q9P2W9 335 aaKnown RBP15.12■□□□□ 0.01
NUP50-201ENST00000347635 TJP2Q9UDY2 1190 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 TRPV2Q9Y5S1 764 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 SNX13Q9Y5W8 968 aa15.12■□□□□ 0.01
NUP50-201ENST00000347635 TFE3P19532 575 aaPredicted RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 MAP4P27816 1152 aaKnown RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 FOXN2P32314 431 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 ADCYAP1R1P41586 468 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 OASLQ15646 514 aaKnown RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 TTC33Q6PID6 262 aaPredicted RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 KCNT2Q6UVM3 1135 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 DHDDSQ86SQ9 333 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 NUP93Q8N1F7 819 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 NKD2Q969F2 451 aaPredicted RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 TRIM13O60858 407 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 CYBBP04839 570 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 GSTT1P30711 240 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 TNFSF9P41273 254 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 LHX1P48742 406 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 ROR2Q01974 943 aaKnown RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 C15orf59Q2T9L4 293 aaPredicted RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 OR6Y1Q8NGX8 325 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 BSNDQ8WZ55 320 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 SEC14L1Q92503 715 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 CNDP1Q96KN2 507 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 IL1RL2Q9HB29 575 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 GID8Q9NWU2 228 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 APPL1Q9UKG1 709 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 LACTBL1A8MY62 500 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 HACD1B0YJ81 288 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 FKTNO75072 461 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 ANXA9O76027 345 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 STMN1P16949 149 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 RAD51Q06609 339 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 MMRN1Q13201 1228 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 PCSK7Q16549 785 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 GLRA4Q5JXX5 417 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 THEMIS2Q5TEJ8 643 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 TMEM169Q96HH4 297 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 ZFRQ96KR1 1074 aaKnown RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 CEP41Q9BYV8 373 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 CCDC90BQ9GZT6 254 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 EBF2Q9HAK2 575 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 WRAP73Q9P2S5 460 aaPredicted RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 PMM2O15305 246 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 C4BPAP04003 597 aaKnown RBP15.11■□□□□ 0.01
NUP50-201ENST00000347635 RINLQ6ZS11 566 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 CATSPER2Q96P56 530 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 RNF157Q96PX1 679 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 MECRQ9BV79 373 aa15.11■□□□□ 0.01
NUP50-201ENST00000347635 TTC36A6NLP5 189 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 AVILO75366 819 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 SUPT3HO75486 399 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 PAX3P23760 479 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 ARHGDIAP52565 204 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 WASHC5Q12768 1159 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 ARHGAP22Q7Z5H3 698 aa15.1■□□□□ 0.01
NUP50-201ENST00000347635 SCUBE3Q8IX30 993 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms