RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 NSFP46459 744 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 JAM2P57087 298 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 NME3Q13232 169 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 CDH18Q13634 790 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 TAF5Q15542 800 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 ZC3H12AQ5D1E8 599 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 PIK3R6Q5UE93 754 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 NAA35Q5VZE5 725 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 RFWD3Q6PCD5 774 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 SFTPA1Q8IWL2 248 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 HMGB4Q8WW32 186 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 SLC39A13Q96H72 371 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 ELOVL2Q9NXB9 296 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 STIM2Q9P246 746 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 WDFY4Q6ZS81 3184 aa16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 RIF1Q5UIP0 2472 aaKnown RBP16.36■□□□□ 0.21
TSPAN4-201ENST00000346501 FAM186AA6NE01 2351 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 PRRT4C9JH25 899 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 M0QYT0 321 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 MAP3K13O43283 966 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 FOXD2O60548 495 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 WASP42768 502 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 GABRB2P47870 512 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 NOMO3P69849 1222 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 RABGAP1LQ5R372 815 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 PPP1R2P3Q6NXS1 205 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 RASSF3Q86WH2 238 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 MFN1Q8IWA4 741 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 AHI1Q8N157 1196 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 CPA5Q8WXQ8 436 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 DDX1Q92499 740 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 LOXL4Q96JB6 756 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 PPP1R9BQ96SB3 815 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 TPSD1Q9BZJ3 242 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 POLR3BQ9NW08 1133 aaPredicted RBP16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 MYO6Q9UM54 1294 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 KIAA1549LQ6ZVL6 1849 aa16.35■□□□□ 0.21
TSPAN4-201ENST00000346501 GOLGA6L7A0A1B0GV03 622 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 KCNU1A8MYU2 1149 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 H0Y626 953 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 GOLGA8SH3BPF8 625 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 EPHB6O15197 1021 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 LRP3O75074 770 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 TPM3P06753 285 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 PABPC1P11940 636 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 DESP17661 470 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 POLR2EP19388 210 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 SULT1E1P49888 294 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 OXCT1P55809 520 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 SRSF5Q13243 272 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 GEN1Q17RS7 908 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 FAM133BQ5BKY9 247 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 MS4A13Q5J8X5 152 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 ACBD5Q5T8D3 534 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 TTC39BQ5VTQ0 682 aaPredicted RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 SERPINA13PQ6UXR4 307 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 TMEM92Q6UXU6 159 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 CHST9Q7L1S5 443 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 LGI2Q8N0V4 545 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 CARNMT1Q8N4J0 409 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 PIWIL1Q96J94 861 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 HSD3B7Q9H2F3 369 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 WDCPQ9H6R7 721 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 ZDHHC4Q9NPG8 344 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 ABCB8Q9NUT2 735 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 GGA2Q9UJY4 613 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 NOCTQ9UK39 431 aaKnown RBP16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 USP18Q9UMW8 372 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 STON1Q9Y6Q2 735 aa16.34■□□□□ 0.21
TSPAN4-201ENST00000346501 A0A1W2PQC6 194 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 ADAM23O75077 832 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 ZNF217O75362 1048 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 IGLV3-25P01717 112 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 CALB1P05937 261 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 TACR2P21452 398 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 ST8SIA6P61647 398 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 DEUP1Q05D60 604 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 BRMS1LQ5PSV4 323 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 RAP1GAP2Q684P5 730 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 XYLT1Q86Y38 959 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 FAM160A2Q8N612 972 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 MDGA1Q8NFP4 955 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 FIBINQ8TAL6 211 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 SLC20A1Q8WUM9 679 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 GABRG3Q99928 467 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 CBX8Q9HC52 389 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 CACNA2D2Q9NY47 1150 aa16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 KIAA1522Q9P206 1035 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 THAP10Q9P2Z0 257 aaPredicted RBP16.33■□□□□ 0.2
TSPAN4-201ENST00000346501 TEX33O43247 280 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 CYP1A1P04798 512 aaPredicted RBP16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 TNFAIP3P21580 790 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 HLA-FP30511 346 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 SLC6A4P31645 630 aa16.32■□□□□ 0.2
TSPAN4-201ENST00000346501 FMO1Q01740 532 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms