RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 TRIM72Q6ZMU5 477 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 MDGA1Q8NFP4 955 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 TSTD1Q8NFU3 115 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 ADAM32Q8TC27 787 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 SLC20A1Q8WUM9 679 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 BHMTQ93088 406 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 C18orf8Q96DM3 657 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 LMLNQ96KR4 655 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 BTN2A3PQ96KV6 586 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 SPAG5Q96R06 1193 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 NPY6RQ99463 290 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 ADAM33Q9BZ11 813 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 TMEM51Q9NW97 253 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 CEP250Q9BV73 2442 aa20.59■□□□□ 0.89
CLTA-202ENST00000345519 UNGP13051 313 aaPredicted RBP20.58■□□□□ 0.89
CLTA-202ENST00000345519 MMP8P22894 467 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 TAF3Q5VWG9 929 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 TMEM215Q68D42 235 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 HEATR6Q6AI08 1181 aaKnown RBP20.58■□□□□ 0.89
CLTA-202ENST00000345519 OR6B2Q6IFH4 312 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 CCDC33Q8N5R6 958 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 ZNF557Q8N988 423 aaPredicted RBP20.58■□□□□ 0.89
CLTA-202ENST00000345519 TMA16Q96EY4 203 aaKnown RBP20.58■□□□□ 0.89
CLTA-202ENST00000345519 PRMT1Q99873 361 aaKnown RBP20.58■□□□□ 0.89
CLTA-202ENST00000345519 SYT11Q9BT88 431 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 TTYH3Q9C0H2 523 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.58■□□□□ 0.89
CLTA-202ENST00000345519 CALCOCO1Q9P1Z2 691 aa20.58■□□□□ 0.89
CLTA-202ENST00000345519 THAP10Q9P2Z0 257 aaPredicted RBP20.58■□□□□ 0.89
CLTA-202ENST00000345519 LRP3O75074 770 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 RPP40O75818 363 aaKnown RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 APOEP02649 317 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 SLC2A3P11169 496 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 PXNP49023 591 aaPredicted RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 CDK17Q00537 523 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 CENPCQ03188 943 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 SRSF5Q13243 272 aaKnown RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 MS4A13Q5J8X5 152 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 RFWD3Q6PCD5 774 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 ERICH1Q86X53 443 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 HJURPQ8NCD3 748 aaPredicted RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 WFIKKN2Q8TEU8 576 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 BAP1Q92560 729 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 MYEOVQ96EZ4 313 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 ACOX2Q99424 681 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 DDX50Q9BQ39 737 aaKnown RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 NUCKS1Q9H1E3 243 aaKnown RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 POLMQ9NP87 494 aaPredicted RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 XPO7Q9UIA9 1087 aaKnown RBP20.57■□□□□ 0.88
CLTA-202ENST00000345519 TMEM59LQ9UK28 342 aa20.57■□□□□ 0.88
CLTA-202ENST00000345519 TGM1P22735 817 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 PTP4A2Q12974 167 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 SIM2Q14190 667 aaPredicted RBP20.56■□□□□ 0.88
CLTA-202ENST00000345519 E2F5Q15329 346 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 ZSCAN23Q3MJ62 389 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 ZC3H12AQ5D1E8 599 aaKnown RBP20.56■□□□□ 0.88
CLTA-202ENST00000345519 NAA35Q5VZE5 725 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 MSANTD4Q8NCY6 345 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 WFDC5Q8TCV5 224 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 LOXL4Q96JB6 756 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 SYNCQ9H7C4 482 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 CBX8Q9HC52 389 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 ZDHHC4Q9NPG8 344 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 PI4KAP42356 2102 aa20.56■□□□□ 0.88
CLTA-202ENST00000345519 GOLGA6L7A0A1B0GV03 622 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 TIMM44O43615 452 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 GRAP2O75791 330 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 ALDH1A2O94788 518 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 HOXB2P14652 356 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 CCR1P32246 355 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 GBP1P32455 592 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 NR1I3Q14994 352 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 C5orf22Q49AR2 442 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 FIGNQ5HY92 759 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 TRNP1Q6NT89 227 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 ADIPOR2Q86V24 386 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 AHI1Q8N157 1196 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 FIBINQ8TAL6 211 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
CLTA-202ENST00000345519 PDCL3Q9H2J4 239 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 FAM204AQ9H8W3 233 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 DDIT4Q9NX09 232 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 ELOVL2Q9NXB9 296 aa20.55■□□□□ 0.88
CLTA-202ENST00000345519 TSPAN3O60637 253 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 RETP07949 1114 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 FLT3P36888 993 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 PBX1P40424 430 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 CXCR3P49682 368 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 SLC25A52Q3SY17 297 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 FILIP1LQ4L180 1135 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 BRMS1LQ5PSV4 323 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 TTC39BQ5VTQ0 682 aaPredicted RBP20.54■□□□□ 0.88
CLTA-202ENST00000345519 ANO7Q6IWH7 933 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 CACNA2D4Q7Z3S7 1137 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 IRF2BP2Q7Z5L9 587 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 C11orf74Q86VG3 221 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 PHF13Q86YI8 300 aaPredicted RBP20.54■□□□□ 0.88
CLTA-202ENST00000345519 CHPFQ8IZ52 775 aa20.54■□□□□ 0.88
CLTA-202ENST00000345519 FAM160A2Q8N612 972 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms