RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FNIP1Q8TF40 1166 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 SLC39A13Q96H72 371 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 FCRL2Q96LA5 508 aaPredicted RBP12.29□□□□□ -0.44
SNCA-202ENST00000345009 CFAP57Q96MR6 1250 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 XPO6Q96QU8 1125 aaKnown RBP12.29□□□□□ -0.44
SNCA-202ENST00000345009 SPHK2Q9NRA0 654 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 HEBP1Q9NRV9 189 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 INTUQ9ULD6 942 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 CA14Q9ULX7 337 aa12.29□□□□□ -0.44
SNCA-202ENST00000345009 TMEM191CA6NGB0 347 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 KCNU1A8MYU2 1149 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.28□□□□□ -0.44
SNCA-202ENST00000345009 MYO1FO00160 1098 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 SCAMP3O14828 347 aaKnown RBP12.28□□□□□ -0.44
SNCA-202ENST00000345009 NCAM2O15394 837 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 ACSL4O60488 711 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 GREM1O60565 184 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 MOCS2O96007 188 aaPredicted RBP12.28□□□□□ -0.44
SNCA-202ENST00000345009 CYP1A2P05177 515 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 TMEM253P0C7T8 217 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 ADH5P11766 374 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 ARSAP15289 507 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 MAGEA1P43355 309 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 CXCR3P49682 368 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 ACAP1Q15027 740 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 MPPE1Q53F39 396 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 LY6G5CQ5SRR4 150 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 RHBDF2Q6PJF5 856 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 TPRG1Q6ZUI0 275 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 ZNF557Q8N988 423 aaPredicted RBP12.28□□□□□ -0.44
SNCA-202ENST00000345009 CCDC112Q8NEF3 446 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 RIN3Q8TB24 985 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 FAM3CQ92520 227 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 TMA16Q96EY4 203 aaKnown RBP12.28□□□□□ -0.44
SNCA-202ENST00000345009 TBCBQ99426 244 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 BBS2Q9BXC9 721 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 THAP2Q9H0W7 228 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 HPS4Q9NQG7 708 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 CTTNBP2NLQ9P2B4 639 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 IP6K2Q9UHH9 426 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 STOML2Q9UJZ1 356 aa12.28□□□□□ -0.44
SNCA-202ENST00000345009 EPN1Q9Y6I3 576 aaPredicted RBP12.28□□□□□ -0.44
SNCA-202ENST00000345009 TCRBV5S1A1TA0A578 114 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 TMEM221A6NGB7 291 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 EIF3CLB5ME19 914 aaKnown RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 SPECC1L-ADORA2AF8WAN1 911 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 M0R296 226 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 DLL1O00548 723 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 ENDOD1O94919 500 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 NDUFA10O95299 355 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 LCA5LO95447 670 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 FECHP22830 423 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 PSMA2P25787 234 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 GJA4P35212 333 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 AIF1P55008 147 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 STARD6P59095 220 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 RPL7AP62424 266 aaKnown RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 KRT83P78385 493 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 GRSF1Q12849 480 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNCA-202ENST00000345009 EIF4EBP2Q13542 120 aaPredicted RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 PIGHQ14442 188 aaPredicted RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 CDO1Q16878 200 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 CCDC14Q49A88 953 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 MPP7Q5T2T1 576 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 LRRC31Q6UY01 552 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 TPGS1Q6ZTW0 290 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 TMEM25Q86YD3 366 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 SUGP1Q8IWZ8 645 aaKnown RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 RHOT2Q8IXI1 618 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 JOSD2Q8TAC2 188 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 TTC8Q8TAM2 541 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 DDI1Q8WTU0 396 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 FAM172AQ8WUF8 416 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 CENPIQ92674 756 aaPredicted RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 ASIC4Q96FT7 647 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 HAPLN3Q96S86 360 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 EIF3CQ99613 913 aaKnown RBP12.27□□□□□ -0.45
SNCA-202ENST00000345009 NUP85Q9BW27 656 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 C1QTNF1Q9BXJ1 281 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 TKTL2Q9H0I9 626 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 PIGVQ9NUD9 493 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 SPTLC3Q9NUV7 552 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 MARK1Q9P0L2 795 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 MUC3AQ02505 3323 aa12.27□□□□□ -0.45
SNCA-202ENST00000345009 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 KANSL1LA0AUZ9 987 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 NEDD8-MDP1E9PL57 170 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 F5H5T6 163 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 HOXC11O43248 304 aaPredicted RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 GJB6O95452 261 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 CYP17A1P05093 508 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 TYRP14679 529 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 CTHP32929 405 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 EIF2DP41214 584 aaKnown RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 PITX1P78337 314 aaPredicted RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 E2F5Q15329 346 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 C15orf59Q2T9L4 293 aaPredicted RBP12.26□□□□□ -0.45
SNCA-202ENST00000345009 RABGAP1LQ5R372 815 aa12.26□□□□□ -0.45
SNCA-202ENST00000345009 TTC39BQ5VTQ0 682 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms