RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ARMCX6Q7L4S7 300 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 TMEFF1Q8IYR6 380 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 PGBD3Q8N328 593 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 C12orf50Q8NA57 414 aaPredicted RBP15.01□□□□□ -0.01
HMGN3-202ENST00000344726 MYEOVQ96EZ4 313 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 SLC39A13Q96H72 371 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 PPP1R13BQ96KQ4 1090 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 VPS16Q9H269 839 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 LHX5Q9H2C1 402 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
HMGN3-202ENST00000344726 ATXN2Q99700 1313 aaKnown RBP15□□□□□ -0.01
HMGN3-202ENST00000344726 LNP1A1A4G5 178 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 ACSL4O60488 711 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 MBD3O95983 291 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 IGLV3-25P01717 112 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 ERBB2P04626 1255 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 IL12RB1P42701 662 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 DHPSP49366 369 aaPredicted RBP15□□□□□ -0.01
HMGN3-202ENST00000344726 LIMK1P53667 647 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 STX1AQ16623 288 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 PTPN20Q4JDL3 420 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 CCDC183Q5T5S1 534 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 NUGGCQ68CJ6 796 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 RNF43Q68DV7 783 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 SMYD5Q6GMV2 418 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 SASS6Q6UVJ0 657 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 ANKS1BQ7Z6G8 1248 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 UNC45BQ8IWX7 931 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 WFDC5Q8TCV5 224 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 SORCS1Q8WY21 1168 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 TMA16Q96EY4 203 aaKnown RBP15□□□□□ -0.01
HMGN3-202ENST00000344726 SERPINB11Q96P15 392 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 SLC2A11Q9BYW1 496 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 GANQ9H2C0 597 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 HSD3B7Q9H2F3 369 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 POPDC2Q9HBU9 364 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 TMEM74BQ9NUR3 256 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 ANO10Q9NW15 660 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 XPO7Q9UIA9 1087 aaKnown RBP15□□□□□ -0.01
HMGN3-202ENST00000344726 TLR6Q9Y2C9 796 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 STON1Q9Y6Q2 735 aa15□□□□□ -0.01
HMGN3-202ENST00000344726 NUMA1Q14980 2115 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 IGHV1OR15-9A0A0B4J2B8 117 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 EPHB6O15197 1021 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 IRAK2O43187 625 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 FOXD2O60548 495 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-202ENST00000344726 CYP11B1P15538 503 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 HLA-FP30511 346 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 KRT9P35527 623 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 YWHAZP63104 245 aaKnown RBP14.99□□□□□ -0.01
HMGN3-202ENST00000344726 NNTQ13423 1086 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 EIF4EBP2Q13542 120 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-202ENST00000344726 ENPP2Q13822 863 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 NCAPHQ15003 741 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 STPG1Q5TH74 334 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 PIK3R6Q5UE93 754 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 OLFML1Q6UWY5 402 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 FAM183BPQ6ZVS7 135 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 CYP2U1Q7Z449 544 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 C11orf74Q86VG3 221 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 DEFB119Q8N690 84 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 DDX1Q92499 740 aaKnown RBP14.99□□□□□ -0.01
HMGN3-202ENST00000344726 AZIN2Q96A70 460 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 MRGPRX1Q96LB2 322 aa14.99□□□□□ -0.01
HMGN3-202ENST00000344726 PRICKLE1Q96MT3 831 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-202ENST00000344726 THAP10Q9P2Z0 257 aaPredicted RBP14.99□□□□□ -0.01
HMGN3-202ENST00000344726 FAM170AA1A519 330 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 F8VZ95 297 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 CAPN9O14815 690 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 TBL1XO60907 577 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 GRAP2O75791 330 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 TRUB2O95900 331 aaKnown RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 MOCS2O96007 188 aaPredicted RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 SLC11A2P49281 568 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 COPB1P53618 953 aaKnown RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 ZNF445P59923 1031 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 MYL5Q02045 173 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 ZNF234Q14588 700 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 FUT11Q495W5 492 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 ZC3H12AQ5D1E8 599 aaKnown RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 PPM1JQ5JR12 505 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 KIAA0907Q7Z7F0 614 aaPredicted RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 DEFB106AQ8N104 65 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 PIGKQ92643 395 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 SPACA7Q96KW9 195 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 SLC2A13Q96QE2 648 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 EDEM2Q9BV94 578 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 STK33Q9BYT3 514 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 MKRN2Q9H000 416 aaKnown RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 NUCKS1Q9H1E3 243 aaKnown RBP14.98□□□□□ -0.01
HMGN3-202ENST00000344726 ELOVL2Q9NXB9 296 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 CYP8B1Q9UNU6 501 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 SIK3Q9Y2K2 1263 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 ADAMTS9Q9P2N4 1935 aa14.98□□□□□ -0.01
HMGN3-202ENST00000344726 ZNF18P17022 549 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 ITPKAP23677 461 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 PRKCHP24723 683 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 CDH5P33151 784 aaPredicted RBP14.97□□□□□ -0.01
HMGN3-202ENST00000344726 BPIFB4P59827 614 aa14.97□□□□□ -0.01
HMGN3-202ENST00000344726 RPS24P62847 133 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms