RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 METTL21CQ5VZV1 264 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 ZPBP2Q6X784 338 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 OR7A2PQ8NGA2 310 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 FAM172AQ8WUF8 416 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 SPIRE2Q8WWL2 714 aa4.9□□□□□ -1.62
CSMD3-203ENST00000343508 CNTNAP4Q9C0A0 1308 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 NFKBIAP25963 317 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 PPIL2Q13356 520 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 FRG1Q14331 258 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ANGPTL8Q6UXH0 198 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 DSELQ8IZU8 1212 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 OSCP1Q8WVF1 389 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 CERS2Q96G23 380 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 PAWRQ96IZ0 340 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 TUBGCP5Q96RT8 1024 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 MTG1Q9BT17 334 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 MECRQ9BV79 373 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 RMI1Q9H9A7 625 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 STMN3Q9NZ72 180 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ADAM28Q9UKQ2 775 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 E2F8A0AVK6 867 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 CCDC154A6NI56 674 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 F8VP50 259 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SLC22A2O15244 555 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 RGS5O15539 181 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ALOX5P09917 674 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ZNF12P17014 697 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 CLK2P49760 499 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 CDH17Q12864 832 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 TRAF3Q13114 568 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SCARA3Q6AZY7 606 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ENDOVQ8N8Q3 282 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 KCTD14Q9BQ13 255 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 TARS2Q9BW92 718 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 PLK2Q9NYY3 685 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 AP4E1Q9UPM8 1137 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ERI2A8K979 691 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 MATN2O00339 956 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 LZTS3O60299 673 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 VPS4BO75351 444 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 NR3C2P08235 984 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 RPL14P50914 215 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 RPL10AP62906 217 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 BST1Q10588 318 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 LIPMQ5VYY2 423 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ZDHHC24Q6UX98 284 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 IFNEQ86WN2 208 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SMARCAD1Q9H4L7 1026 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 PHGDHO43175 533 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SOAT2O75908 522 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 NCAM1P13591 858 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 KCNA2P16389 499 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ADSLP30566 484 aaPredicted RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ACADVLP49748 655 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 NOMO3P69849 1222 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ENPEPQ07075 957 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 FUT11Q495W5 492 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 DIS3LQ8TF46 1054 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SLC44A1Q8WWI5 657 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 POP5Q969H6 163 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 TEX13BQ9BXU2 312 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SIK2Q9H0K1 926 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 ZCWPW1Q9H0M4 648 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 CHST12Q9NRB3 414 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 DNAJC28Q9NX36 388 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SNX9Q9Y5X1 595 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 A0A1B0GUL6 1792 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 EVPLLA8MZ36 301 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 TRIM24O15164 1050 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 HMGCRP04035 888 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 HOXB6P17509 224 aaKnown RBP4.9□□□□□ -1.63
CSMD3-203ENST00000343508 C4BPBP20851 252 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 PRDX6P30041 224 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 CA8P35219 290 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 LPCAT4Q643R3 524 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 SLC7A14Q8TBB6 771 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 EGFL8Q99944 293 aa4.9□□□□□ -1.63
CSMD3-203ENST00000343508 A0A096LPK6 155 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 SPDYE5A6NIY4 337 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 EML1O00423 815 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 IMPDH2P12268 514 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 GYS1P13807 737 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 TOP3AQ13472 1001 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-203ENST00000343508 FAXCQ5TGI0 409 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 PRR5LQ6MZQ0 368 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 MRNIPQ6NTE8 343 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 CCDC81Q6ZN84 652 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 RELL1Q8IUW5 271 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 TMEM126BQ8IUX1 230 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 ERI1Q8IV48 349 aaKnown RBP4.89□□□□□ -1.63
CSMD3-203ENST00000343508 MIER2Q8N344 545 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 APOL4Q9BPW4 351 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 NMUR2Q9GZQ4 415 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 MAN1C1Q9NR34 630 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 TUBGCP4Q9UGJ1 667 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 ZMYND8Q9ULU4 1186 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-203ENST00000343508 PSMD13Q9UNM6 376 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 WDR37Q9Y2I8 494 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 TPST1O60507 370 aa4.89□□□□□ -1.63
CSMD3-203ENST00000343508 LDLRP01130 860 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms