RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 AP1B1Q10567 949 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 MTM1Q13496 603 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 PDK1Q15118 436 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 PPP1R21Q6ZMI0 780 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 TP53INP2Q8IXH6 220 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 FBXO36Q8NEA4 188 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 CASP10Q92851 521 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 SMOC2Q9H3U7 446 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 WBP1LQ9NX94 342 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 ARHGEF38Q9NXL2 777 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 OR12D3Q9UGF7 316 aa20.64■□□□□ 0.89
RTN1-202ENST00000342503 TBC1D4O60343 1298 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 CPB1P15086 417 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 ZNF135P52742 658 aaPredicted RBP20.63■□□□□ 0.89
RTN1-202ENST00000342503 CCDC38Q502W7 563 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 C1orf53Q5VUE5 145 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 EPAS1Q99814 870 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 FBXO44Q9H4M3 255 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 OSER1Q9NX31 292 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 LGALS13Q9UHV8 139 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 NUDT5Q9UKK9 219 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 TBX21Q9UL17 535 aa20.63■□□□□ 0.89
RTN1-202ENST00000342503 GREB1Q4ZG55 1949 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 EXOC1LA0A1B0GW35 172 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 MTMR11A4FU01 709 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 E7EVH7 732 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 H7C4K7 107 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 PPP1R12AO14974 1030 aaPredicted RBP20.62■□□□□ 0.89
RTN1-202ENST00000342503 MSI1O43347 362 aaKnown RBP20.62■□□□□ 0.89
RTN1-202ENST00000342503 SOAT2O75908 522 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 MMP13P45452 471 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 GLUD2P49448 558 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 USP46P62068 366 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 BRMS1LQ5PSV4 323 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 ANKRD20A2Q5SQ80 823 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 ANKRD20A1Q5TYW2 823 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 ANKRD20A3Q5VUR7 823 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 CNKSR3Q6P9H4 555 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 ARHGEF18Q6ZSZ5 1173 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 PDZD4Q76G19 769 aaPredicted RBP20.62■□□□□ 0.89
RTN1-202ENST00000342503 EXOC3L1Q86VI1 746 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 VPS52Q8N1B4 723 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 CCNYQ8ND76 341 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 GPR152Q8TDT2 470 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 P2RY11Q96G91 374 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 TTPALQ9BTX7 342 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 OSBPL2Q9H1P3 480 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 PRDM12Q9H4Q4 367 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 CNOT10Q9H9A5 744 aaKnown RBP20.62■□□□□ 0.89
RTN1-202ENST00000342503 SLC27A5Q9Y2P5 690 aa20.62■□□□□ 0.89
RTN1-202ENST00000342503 A0A0A0MRY4 1105 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 LRIG2O94898 1065 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 VNN2O95498 520 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 GCAP28676 217 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 ATP5DP30049 168 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 SSTR1P30872 391 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 GPR17Q13304 367 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 IKBKEQ14164 716 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 RNF19BQ6ZMZ0 732 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 MON1AQ86VX9 555 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 CYP4X1Q8N118 509 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 ATP11CQ8NB49 1132 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 SPATA13Q96N96 652 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 SELENOSQ9BQE4 189 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 EURLQ9NYK6 297 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 GMIPQ9P107 970 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 CHMP2BQ9UQN3 213 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 RAD54BQ9Y620 910 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 CDH16O75309 829 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 AVILO75366 819 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 APRTP07741 180 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 LSP1P33241 339 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 PHBP35232 272 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 ELK3P41970 407 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 CBLBQ13191 982 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 PRSS55Q6UWB4 352 aaPredicted RBP20.61■□□□□ 0.89
RTN1-202ENST00000342503 ANKS3Q6ZW76 656 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 IGDCC3Q8IVU1 814 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 PALM2Q8IXS6 379 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 NPWQ8N729 165 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 MDM1Q8TC05 714 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 SPPL2BQ8TCT7 592 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 ARHGEF2Q92974 986 aaKnown RBP20.61■□□□□ 0.89
RTN1-202ENST00000342503 VWCEQ96DN2 955 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 ZNF333Q96JL9 665 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 FRMD8Q9BZ67 464 aaPredicted RBP20.61■□□□□ 0.89
RTN1-202ENST00000342503 CRISPLD1Q9H336 500 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 TMEM39AQ9NV64 488 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 IL37Q9NZH6 218 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 TBK1Q9UHD2 729 aa20.61■□□□□ 0.89
RTN1-202ENST00000342503 POC1B-GALNT4F8VUJ3 575 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 RNF103O00237 685 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 STK10O94804 968 aaKnown RBP20.6■□□□□ 0.89
RTN1-202ENST00000342503 TPSB2P20231 275 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 EPHB2P29323 1055 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 CCR1P32246 355 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 TPSAB1Q15661 275 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 DENND5BQ6ZUT9 1274 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 TAOK1Q7L7X3 1001 aa20.6■□□□□ 0.89
RTN1-202ENST00000342503 ARHGAP18Q8N392 663 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms