RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 BEND5Q7L4P6 421 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 C14orf80Q86SX3 495 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 ATP6V0D2Q8N8Y2 350 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 CTNNBL1Q8WYA6 563 aaPredicted RBP13.69□□□□□ -0.22
TUBD1-202ENST00000340993 TRIM11Q96F44 468 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
TUBD1-202ENST00000340993 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
TUBD1-202ENST00000340993 P2RY13Q9BPV8 354 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 LTB4R2Q9NPC1 389 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 OSGEPQ9NPF4 335 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 HS3ST4Q9Y661 456 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 CACNA1IQ9P0X4 2223 aa13.69□□□□□ -0.22
TUBD1-202ENST00000340993 KCNU1A8MYU2 1149 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 H2AFZP0C0S5 128 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 TACR2P21452 398 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 OPRD1P41143 372 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 GSCP56915 257 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 GAD2Q05329 585 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 MS4A13Q5J8X5 152 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 TMEM31Q5JXX7 168 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 Q6ZS52 159 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 H2AFVQ71UI9 128 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 CARNMT1Q8N4J0 409 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 WFDC5Q8TCV5 224 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 CD101Q93033 1021 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 SHDQ96IW2 340 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 VCPIP1Q96JH7 1222 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 BTN2A3PQ96KV6 586 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 C8orf33Q9H7E9 229 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 SLC12A6Q9UHW9 1150 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 NENFQ9UMX5 172 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 ZNF510Q9Y2H8 683 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 SCINQ9Y6U3 715 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 TULP3O75386 442 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 CYBBP04839 570 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 MYBL1P10243 752 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 GLULP15104 373 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 TCF4P15884 667 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 CHKAP35790 457 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 PRKCQQ04759 706 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 RING1Q06587 406 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 FYB2Q5VWT5 728 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 FSTL4Q6MZW2 842 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 PPP1R2P3Q6NXS1 205 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 RALGPS2Q86X27 583 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 PYROXD2Q8N2H3 581 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 PJA1Q8NG27 643 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 NT5C3BQ969T7 300 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 TMA16Q96EY4 203 aaKnown RBP13.68□□□□□ -0.22
TUBD1-202ENST00000340993 ARHGEF4Q9NR80 690 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 SIT1Q9Y3P8 196 aa13.68□□□□□ -0.22
TUBD1-202ENST00000340993 TMEM191CA6NGB0 347 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 F5H5T6 163 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 TNNT1P13805 278 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 CYLC1P35663 651 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-202ENST00000340993 MAGEA1P43355 309 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 CXCR3P49682 368 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 STARD6P59095 220 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 NNTQ13423 1086 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 EIF4EBP2Q13542 120 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-202ENST00000340993 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 C2orf27AQ580R0 203 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 ASTLQ6HA08 431 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-202ENST00000340993 SUGP1Q8IWZ8 645 aaKnown RBP13.67□□□□□ -0.22
TUBD1-202ENST00000340993 TMEM105Q8N8V8 129 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 RPRD1AQ96P16 312 aaPredicted RBP13.67□□□□□ -0.22
TUBD1-202ENST00000340993 CNPY3Q9BT09 278 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 ZWILCHQ9H900 591 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 LMAN1LQ9HAT1 526 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 MRPL47Q9HD33 250 aaKnown RBP13.67□□□□□ -0.22
TUBD1-202ENST00000340993 TRPV5Q9NQA5 729 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 RRN3Q9NYV6 651 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 MPP6Q9NZW5 540 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 IMPACTQ9P2X3 320 aa13.67□□□□□ -0.22
TUBD1-202ENST00000340993 A0A0U1RQJ8 604 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 TBC1D3BA6NDS4 549 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 CYP1A2P05177 515 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 SLC2A3P11169 496 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 HOXD9P28356 352 aaPredicted RBP13.66□□□□□ -0.22
TUBD1-202ENST00000340993 HOXC13P31276 330 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 PTPN9P43378 593 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 GRSF1Q12849 480 aaKnown RBP eCLIP13.66□□□□□ -0.22
TUBD1-202ENST00000340993 AUHQ13825 339 aaKnown RBP13.66□□□□□ -0.22
TUBD1-202ENST00000340993 PPP2R5DQ14738 602 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 SPA17Q15506 151 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 EMC10Q5UCC4 262 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 RWDD4Q6NW29 188 aaKnown RBP13.66□□□□□ -0.22
TUBD1-202ENST00000340993 FBXL22Q6P050 247 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 PKN3Q6P5Z2 889 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 TFAP2DQ7Z6R9 452 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 TMEM139Q8IV31 216 aa13.66□□□□□ -0.22
TUBD1-202ENST00000340993 CCDC105Q8IYK2 499 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms