RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ECHDC2Q86YB7 292 aa10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 KIF2BQ8N4N8 673 aa10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 OR52K1Q8NGK4 314 aa10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 RSPH1Q8WYR4 309 aa10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 WDR83Q9BRX9 315 aaKnown RBP10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 SMYD2Q9NRG4 433 aa10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 ABCF3Q9NUQ8 709 aa10.49□□□□□ -0.73
RBFOX1-202ENST00000340209 A0A0G2JND7 137 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 A0A0U1RQF3 1178 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TBKBP1A7MCY6 615 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ERFP50548 548 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TAF12Q16514 161 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 CEP128Q6ZU80 1094 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 CIR1Q86X95 450 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 IPMKQ8NFU5 416 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 AGR3Q8TD06 166 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TCP10LQ8TDR4 215 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 USP29Q9HBJ7 922 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 NPHS2Q9NP85 383 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PRDM5Q9NQX1 630 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 MTMR10Q9NXD2 777 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 VANGL2Q9ULK5 521 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 SIP14410 1827 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 A0A1W2PQ45 241 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 A0A1W2PQY0 241 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TTC24A2A3L6 582 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TRDMT1O14717 391 aaKnown RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PMPCBO75439 489 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 DAB1O75553 588 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ADRA1BP35368 520 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PDE1BQ01064 536 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ZDHHC17Q8IUH5 632 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 SPNS2Q8IVW8 549 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 MECRQ9BV79 373 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 CDH9Q9ULB4 789 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 FZD10Q9ULW2 581 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 Q9Y3F1 56 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 A0A1W2PQH9 124 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 A6NNZ2 444 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ERVK-10P10266 1014 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 LRPAP1P30533 357 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PTPN9P43378 593 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PCBP1Q15365 356 aaKnown RBP eCLIP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 MTFR1Q15390 333 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 EML3Q32P44 896 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TUBB8Q3ZCM7 444 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 NOMO2Q5JPE7 1267 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 INTS6LQ5JSJ4 861 aaKnown RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 KIAA1841Q6NSI8 718 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ARHGAP36Q6ZRI8 547 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 ZNF669Q96BR6 464 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 EPAS1Q99814 870 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 COLEC11Q9BWP8 271 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 RNF208Q9H0X6 261 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PTCH2Q9Y6C5 1203 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 LRIG2O94898 1065 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 IRF1P10914 325 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 DPYSL2Q16555 572 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 KLHL38Q2WGJ6 581 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TADA2BQ86TJ2 420 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TRABD2AQ86V40 505 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 PNPLA1Q8N8W4 532 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 DQX1Q8TE96 717 aaKnown RBP10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 TBC1D13Q9NVG8 400 aa10.48□□□□□ -0.73
RBFOX1-202ENST00000340209 C2orf71A6NGG8 1288 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 COPEO14579 308 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 FOXN2P32314 431 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 ZBTB16Q05516 673 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 GRIK3Q13003 919 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 MBTPS1Q14703 1052 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 DRICH1Q6PGQ1 229 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 PRSS55Q6UWB4 352 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 ZCCHC23Q6ZST2 131 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 OTOP3Q7RTS5 596 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 TBC1D1Q86TI0 1168 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 SLC25A41Q8N5S1 370 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 ARMC2Q8NEN0 867 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 VPS11Q9H270 941 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 PCDHB7Q9Y5E2 793 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 PPP1R12AO14974 1030 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 TM4SF4P48230 202 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 WDR4P57081 412 aaKnown RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 C10orf120Q5SQS8 335 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 TMEM86AQ8N2M4 240 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 NPWQ8N729 165 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 SPATA22Q8NHS9 363 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 AZIN2Q96A70 460 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 RPS6KL1Q9Y6S9 549 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 GOLGA8CPA6NN73 597 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 I6L893 689 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 DPYSL4O14531 572 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 FYNP06241 537 aa10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 ZFXP17010 805 aaPredicted RBP10.47□□□□□ -0.73
RBFOX1-202ENST00000340209 MAXP61244 160 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms