RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 RIC8BQ9NVN3 520 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 RBM22Q9NW64 420 aaKnown RBP eCLIP8.89□□□□□ -0.99
RTN3-202ENST00000339997 RRN3Q9NYV6 651 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 NDUFA13Q9P0J0 144 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 CRLS1Q9UJA2 301 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 GTF2A1LQ9UNN4 478 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 FAM50BQ9Y247 325 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 MYRFQ9Y2G1 1151 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 A0A0B4J269 797 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 CAPN8A6NHC0 703 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 KLRC4O43908 158 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 FAM155BO75949 473 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 TNFAIP8O95379 198 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 NTRK1P04629 796 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 SLC2A4P14672 509 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 ZNF37AP17032 561 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 CCR1P32246 355 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 RARRES1P49788 294 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 SCNN1BP51168 640 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 ZNF618Q5T7W0 954 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 FNDC5Q8NAU1 212 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 EPS8L1Q8TE68 723 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 MTFMTQ96DP5 389 aaKnown RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 KCTD14Q9BQ13 255 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 ARL8BQ9NVJ2 186 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 PIM2Q9P1W9 311 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 TRMT6Q9UJA5 497 aaKnown RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 TSPAN16Q9UKR8 245 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 A0A087WZ62 844 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 SERPINE1P05121 402 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 CAPN1P07384 714 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 ALDH1A3P47895 512 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 IDH2P48735 452 aaKnown RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 ATP12AP54707 1039 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 RPS7P62081 194 aaKnown RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 DCTN2Q13561 401 aaKnown RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 IQSEC1Q6DN90 963 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 TMC7Q7Z402 723 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 UNC45BQ8IWX7 931 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 CENPLQ8N0S6 344 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 FAM13CQ8NE31 585 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 FDXACB1Q9BRP7 624 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 CNPY3Q9BT09 278 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 SLC7A5P2Q9GIP4 190 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 UBAP1Q9NZ09 502 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 KCND2Q9NZV8 630 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 CROTQ9UKG9 612 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 TCRBV5S4A2TA0A5A2 114 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 TPP1O14773 563 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 HNRNPLP14866 589 aaKnown RBP eCLIP8.89□□□□□ -0.992e-12■■■□□ 15.2
RTN3-202ENST00000339997 MGAT5Q09328 741 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 PTK6Q13882 451 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 GRIK5Q16478 980 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 SLC5A9Q2M3M2 681 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 FBXO48Q5FWF7 155 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 CMC1Q7Z7K0 106 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 PALB2Q86YC2 1186 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 ZFPM1Q8IX07 1006 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 NDNQ99608 321 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 OSBPL10Q9BXB5 764 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 WDR55Q9H6Y2 383 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 POLR1BQ9H9Y6 1135 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 GPBP1L1Q9HC44 474 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 SHOC2Q9UQ13 582 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 C3P01024 1663 aa8.89□□□□□ -0.99
RTN3-202ENST00000339997 RGPD8O14715 1765 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
RTN3-202ENST00000339997 PEX11AO75192 247 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 SOAT2O75908 522 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 PIRTP0C851 137 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 STAG3L1P0CL83 205 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 PBLDP30039 288 aaPredicted RBP8.88□□□□□ -0.99
RTN3-202ENST00000339997 CCT8P50990 548 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 NDST1P52848 882 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 SPIDRQ14159 915 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 POLD3Q15054 466 aaPredicted RBP8.88□□□□□ -0.99
RTN3-202ENST00000339997 TCEA2Q15560 299 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 ATG14Q6ZNE5 492 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 FAM126BQ8IXS8 530 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 FBXW8Q8N3Y1 598 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 DAGLBQ8NCG7 672 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 CALML6Q8TD86 181 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 NSMCE2Q96MF7 247 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 INPP4AQ96PE3 977 aaPredicted RBP8.88□□□□□ -0.99
RTN3-202ENST00000339997 SMARCAD1Q9H4L7 1026 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 VTA1Q9NP79 307 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 ZNF212Q9UDV6 495 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 A0A0A6YYK5 440 aaPredicted RBP8.88□□□□□ -0.99
RTN3-202ENST00000339997 KANSL1LA0AUZ9 987 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 IQCA1LA6NCM1 817 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 AGPSO00116 658 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 TIMM44O43615 452 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 PLA2G6O60733 806 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 ERCC2P18074 760 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 HSPA13P48723 471 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 DPYSL3Q14195 570 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 PLCL1Q15111 1095 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 LRRC55Q6ZSA7 311 aa8.88□□□□□ -0.99
RTN3-202ENST00000339997 CACUL1Q86Y37 369 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms