RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 PEX1O43933 1283 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TGFB3P10600 412 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 RANBP1P43487 201 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 MRPS22P82650 360 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DPY19L2Q6NUT2 758 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CCNJLQ8IV13 435 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TDRD5Q8NAT2 981 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SDCBP2Q9H190 292 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DPEP3Q9H4B8 488 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 WDR55Q9H6Y2 383 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 KCNK4Q9NYG8 393 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 VANGL2Q9ULK5 521 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 OAZ1P54368 228 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 NSUN2Q08J23 767 aaKnown RBP eCLIP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 MPP3Q13368 585 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SPDYAQ5MJ70 313 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 FBXO47Q5MNV8 452 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 MAP1SQ66K74 1059 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SNX32Q86XE0 403 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 GDPD5Q8WTR4 605 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PDCD6IPQ8WUM4 868 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 ZNF560Q96MR9 790 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PEBP4Q96S96 227 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 ILKAPQ9H0C8 392 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 AP5M1Q9H0R1 490 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TUBGCP4Q9UGJ1 667 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 FAF1Q9UNN5 650 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DTNAQ9Y4J8 743 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CDY2AQ9Y6F7 541 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CDY1Q9Y6F8 540 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CASQ2O14958 399 aaPredicted RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CILPO75339 1184 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TCEA3O75764 348 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 RECQL4O94761 1208 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CSPG5O95196 566 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 LGALS2P05162 132 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 ANPEPP15144 967 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 EPHA3P29320 983 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PMLP29590 882 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TKTL1P51854 596 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 NAGLUP54802 743 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PLEKHG4Q58EX7 1191 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 KLRG1Q96E93 195 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 MOCOSQ96EN8 888 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CCDC68Q9H2F9 335 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SARS2Q9NP81 518 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SYBUQ9NX95 663 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 MFHAS1Q9Y4C4 1052 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SERPINE1P05121 402 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 ETFBP38117 255 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PGGT1BP53609 377 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 BCAT1P54687 386 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DLG2Q15700 870 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 GALNTL6Q49A17 601 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 RARS2Q5T160 578 aaKnown RBP11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DDIASQ8IXT1 998 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 ADGRF2Q8IZF7 708 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 SH3TC2Q8TF17 1288 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DNAJB3Q8WWF6 145 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 PHF21BQ96EK2 531 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 CDRT15Q96T59 188 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 GMLQ99445 158 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 GPR20Q99678 358 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 EPAS1Q99814 870 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 KRT82Q9NSB4 513 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 DCDC2Q9UHG0 476 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 TNFSF13BQ9Y275 285 aa11.38□□□□□ -0.59
SEMA4D-201ENST00000339861 KIAA1551Q9HCM1 1747 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 RNF103-CHMP3A0A140T963 221 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 UBA6A0AVT1 1052 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 PPEF2O14830 753 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TSPAN8P19075 237 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TAF6P49848 677 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 PLIN5Q00G26 463 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 IL1RL1Q01638 556 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 CCDC15Q0P6D6 951 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TAF12Q16514 161 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 OLFML2BQ68BL8 750 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TDRPQ86YL5 185 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 HPS6Q86YV9 775 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TCF7L2Q9NQB0 619 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TNRC6CQ9HCJ0 1690 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TYROBPO43914 113 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 MCF2P10911 925 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 EEF1B2P24534 225 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 BST2Q10589 180 aaKnown RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 LRRC23Q53EV4 343 aaPredicted RBP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 PRAMEF19Q5SWL8 479 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 TTC39CQ8N584 583 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 CCDC185Q8N715 623 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 PDZD8Q8NEN9 1154 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 VPS39Q96JC1 886 aa11.37□□□□□ -0.59
SEMA4D-201ENST00000339861 FRMD8Q9BZ67 464 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms