RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 GUCA1CO95843 209 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
OTOF-203ENST00000339598 HALP42357 657 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 CNTN1Q12860 1018 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 SLC27A1Q6PCB7 646 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 PRELID2Q8N945 189 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 DNAJB3Q8WWF6 145 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 BAP1Q92560 729 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 GLMNQ92990 594 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 CCDC167Q9P0B6 97 aa12.78□□□□□ -0.36
OTOF-203ENST00000339598 PARNO95453 639 aaKnown RBP12.77□□□□□ -0.36
OTOF-203ENST00000339598 SHBGP04278 402 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 FAM58BPP0C7Q3 252 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 FCGR1AP12314 374 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 PGAM1P18669 254 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 KDELR1P24390 212 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 MAPK1P28482 360 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 TUBP50607 506 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 SLC6A3Q01959 620 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 AUHQ13825 339 aaKnown RBP12.77□□□□□ -0.36
OTOF-203ENST00000339598 ACAP1Q15027 740 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 GRIK4Q16099 956 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 PGS1Q32NB8 556 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 ANKS6Q68DC2 871 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 STK32AQ8WU08 396 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.36
OTOF-203ENST00000339598 RRN3Q9NYV6 651 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 MRASO14807 208 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 CYP3A4P08684 503 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 SLC2A4P14672 509 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 ARL4DP49703 201 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 ZNF284Q2VY69 593 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 ZNF280DQ6N043 979 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 NMRAL1Q9HBL8 299 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 SAR1AQ9NR31 198 aa12.77□□□□□ -0.36
OTOF-203ENST00000339598 WNT10BO00744 389 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 TOMM70O94826 608 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 DLGAP3O95886 979 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 RPA3P35244 121 aaPredicted RBP12.77□□□□□ -0.37
OTOF-203ENST00000339598 ABCG1P45844 678 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 RFX3P48380 749 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 MARCKSL1P49006 195 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 NPY2RP49146 381 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 CDK16Q00536 496 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 COL9A3Q14050 684 aaPredicted RBP12.77□□□□□ -0.37
OTOF-203ENST00000339598 FASTKQ14296 549 aaKnown RBP12.77□□□□□ -0.37
OTOF-203ENST00000339598 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 CYP2R1Q6VVX0 501 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 FBXO39Q8N4B4 442 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 USP6NLQ92738 828 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 VPS33AQ96AX1 596 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 LRRC39Q96DD0 335 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 CAPN10Q9HC96 672 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 KCNMB3Q9NPA1 279 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 NDUFAF1Q9Y375 327 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 CAB39Q9Y376 341 aaPredicted RBP12.77□□□□□ -0.37
OTOF-203ENST00000339598 GAKO14976 1311 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 H7C4K7 107 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 CLOCKO15516 846 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 KRT6AP02538 564 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 KRT6BP04259 564 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 KRT6CP48668 564 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 ERAP2Q6P179 960 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 LRRC74BQ6ZQY2 392 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 BNIPLQ7Z465 357 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 RGS18Q9NS28 235 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 MRPL42Q9Y6G3 142 aaKnown RBP12.77□□□□□ -0.37
OTOF-203ENST00000339598 SLIT1O75093 1534 aa12.77□□□□□ -0.37
OTOF-203ENST00000339598 PHGDHO43175 533 aaKnown RBP12.76□□□□□ -0.37
OTOF-203ENST00000339598 FSBPO95073 299 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 ETS1P14921 441 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 CAMK2GQ13555 558 aaPredicted RBP12.76□□□□□ -0.37
OTOF-203ENST00000339598 CNGA2Q16280 664 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 TMC7Q7Z402 723 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 DHFR2Q86XF0 187 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 FAM126BQ8IXS8 530 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 LPCAT1Q8NF37 534 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 GDPD5Q8WTR4 605 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 CASP10Q92851 521 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 DPY30Q9C005 99 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 MID1IP1Q9NPA3 183 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 KRT84Q9NSB2 600 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 VTI1BQ9UEU0 232 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 TRDMT1O14717 391 aaKnown RBP12.76□□□□□ -0.37
OTOF-203ENST00000339598 ITGB6P18564 788 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 CCT8P50990 548 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 NAGLUP54802 743 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
OTOF-203ENST00000339598 SPDYCQ5MJ68 293 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 DACT2Q5SW24 774 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
OTOF-203ENST00000339598 DEFB132Q7Z7B7 95 aa12.76□□□□□ -0.37
OTOF-203ENST00000339598 METTL6Q8TCB7 284 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms