RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 PAPSS1O43252 624 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 VCLP18206 1134 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 EPHA3P29320 983 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 MSLNQ13421 630 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 SLC9B1Q4ZJI4 515 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 TMEM198Q66K66 360 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 OR6B3Q8NGW1 331 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 ATP2A3Q93084 1043 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 EMCNQ9ULC0 261 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 LOXHD1Q8IVV2 1947 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 A0A087WZ62 844 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 C1QAP02745 245 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 RALBP11234 206 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 CPOXP36551 454 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 FBXL19Q6PCT2 694 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 MTHFD1LQ6UB35 978 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 KDELC2Q7Z4H8 507 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 CCDC185Q8N715 623 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 DNAAF3Q8N9W5 541 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 AGAP2Q99490 1192 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 FDXACB1Q9BRP7 624 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 NRDE2Q9H7Z3 1164 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 COPS7BQ9H9Q2 264 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 RPS6KL1Q9Y6S9 549 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 FGF3P11487 239 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 PTPRAP18433 802 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 PDK3Q15120 406 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 CYTH1Q15438 398 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 SPATA24Q86W54 205 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 FBXO16Q8IX29 292 aaPredicted RBP16.6■□□□□ 0.25
SCARB1-202ENST00000339570 COLGALT1Q8NBJ5 622 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 ICA1LQ8NDH6 482 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 SGF29Q96ES7 293 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 RHBDL2Q9NX52 303 aa16.6■□□□□ 0.25
SCARB1-202ENST00000339570 ZBTB14O43829 449 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 FGFR3P22607 806 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 SOX11P35716 441 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 NME3Q13232 169 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 ACAP1Q15027 740 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 ZPBP2Q6X784 338 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 ZNF534Q76KX8 674 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 TFB1MQ8WVM0 346 aaKnown RBP16.59■□□□□ 0.25
SCARB1-202ENST00000339570 OR52B2Q96RD2 323 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 SYBUQ9NX95 663 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 BUD23O43709 281 aaKnown RBP16.59■□□□□ 0.25
SCARB1-202ENST00000339570 CILPO75339 1184 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 MT-CO1P00395 513 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 CHRNGP07510 517 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 ARSAP15289 507 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 PSMB4P28070 264 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 PMLP29590 882 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 FOLH1Q04609 750 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 FAM160B1Q5W0V3 765 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 MBLAC2Q68D91 279 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 EGFL6Q8IUX8 553 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 MAPK15Q8TD08 544 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
SCARB1-202ENST00000339570 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
SCARB1-202ENST00000339570 ABLIM1O14639 778 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 SPAG6O75602 509 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 PIGRP01833 764 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 CCDC130P13994 396 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 ITGAXP20702 1163 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 CRHR1P34998 444 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 CDK7P50613 346 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 PCLAFQ15004 111 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 STILQ15468 1287 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 PACS1Q6VY07 963 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 SEPT1Q8WYJ6 367 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 EZH1Q92800 747 aaPredicted RBP16.58■□□□□ 0.25
SCARB1-202ENST00000339570 KIF12Q96FN5 646 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 SPATA33Q96N06 139 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 LENG8Q96PV6 779 aaPredicted RBP16.58■□□□□ 0.25
SCARB1-202ENST00000339570 TRAPPC9Q96Q05 1148 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 MRPL45Q9BRJ2 306 aaKnown RBP16.58■□□□□ 0.25
SCARB1-202ENST00000339570 SEMA6AQ9H2E6 1030 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 DPEP3Q9H4B8 488 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 COG4Q9H9E3 785 aa16.58■□□□□ 0.25
SCARB1-202ENST00000339570 F8W8V4 182 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 MAFO75444 373 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-202ENST00000339570 CDH5P33151 784 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-202ENST00000339570 EFNA5P52803 228 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 SNX32Q86XE0 403 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 ZNF669Q96BR6 464 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-202ENST00000339570 SCYL1Q96KG9 808 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 CATSPER2Q96P56 530 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 NUF2Q9BZD4 464 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 TMEM134Q9H6X4 195 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 AP4E1Q9UPM8 1137 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 EFR3BQ9Y2G0 817 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 DTNAQ9Y4J8 743 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 SPDYE16A6NNV3 312 aaPredicted RBP16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PLIN3O60664 434 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 ITGA2BP08514 1039 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 HDAC4P56524 1084 aa16.58■□□□□ 0.24
SCARB1-202ENST00000339570 PITX1P78337 314 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms