RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 DCUN1D2Q6PH85 259 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.283e-15■■■□□ 14.7
SRSF3-201ENST00000339436 STRADAQ7RTN6 431 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 PHTF2Q8N3S3 785 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 ATP6V0D2Q8N8Y2 350 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 RNF34Q969K3 372 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 PANX2Q96RD6 677 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 NHEJ1Q9H9Q4 299 aaPredicted RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 ARHGEF38Q9NXL2 777 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 PLK2Q9NYY3 685 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 DLGAP2Q9P1A6 1054 aa13.33□□□□□ -0.28
SRSF3-201ENST00000339436 NYNRINQ9P2P1 1898 aaKnown RBP13.33□□□□□ -0.28
SRSF3-201ENST00000339436 CKAP5Q14008 2032 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FANCMQ8IYD8 2048 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 MUC22E2RYF6 1773 aaPredicted RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 GOLGA6L7A0A1B0GV03 622 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 I6L893 689 aaPredicted RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CCP110O43303 1012 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 PI15O43692 258 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 ENDOD1O94919 500 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 DCNP07585 359 aaKnown RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CHRNB1P11230 501 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 DRD1P21728 446 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FECHP22830 423 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 HOXD9P28356 352 aaPredicted RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 SGSHP51688 502 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 OGDHQ02218 1023 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 MESP2Q0VG99 397 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FZD5Q13467 585 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 LRRC32Q14392 662 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 MPPE1Q53F39 396 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 SH3PXD2AQ5TCZ1 1133 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 PIK3R6Q5UE93 754 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 RNF43Q68DV7 783 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 RFWD3Q6PCD5 774 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CHSY1Q86X52 802 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FNIP1Q8TF40 1166 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FAM172AQ8WUF8 416 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 EZH1Q92800 747 aaPredicted RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CLDN23Q96B33 292 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 THAP2Q9H0W7 228 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 ANLNQ9NQW6 1124 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
SRSF3-201ENST00000339436 SLC12A6Q9UHW9 1150 aa13.32□□□□□ -0.28
SRSF3-201ENST00000339436 NCAM2O15394 837 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 PAGE1O75459 146 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 EGFP01133 1207 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MAGEA9P43362 315 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 RPS9P46781 194 aaKnown RBP13.31□□□□□ -0.28
SRSF3-201ENST00000339436 SLC6A11P48066 632 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 GALK1P51570 392 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 HDAC4P56524 1084 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 KDSRQ06136 332 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 ZNF252P-AS1Q0IIN9 211 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 RAB6CQ53S08 254 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MS4A13Q5J8X5 152 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MPP7Q5T2T1 576 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 RAP1GAP2Q684P5 730 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 NAT16Q8N8M0 369 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 HJURPQ8NCD3 748 aaPredicted RBP13.31□□□□□ -0.28
SRSF3-201ENST00000339436 DDI1Q8WTU0 396 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MYEOVQ96EZ4 313 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 XPO6Q96QU8 1125 aaKnown RBP13.31□□□□□ -0.28
SRSF3-201ENST00000339436 PNKPQ96T60 521 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
SRSF3-201ENST00000339436 CNPY3Q9BT09 278 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 TRIM7Q9C029 511 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 TKTL2Q9H0I9 626 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 RAB6CQ9H0N0 254 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 CHRDQ9H2X0 955 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 WDCPQ9H6R7 721 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
SRSF3-201ENST00000339436 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 RBM12Q9NTZ6 932 aaKnown RBP13.31□□□□□ -0.28
SRSF3-201ENST00000339436 SPTLC3Q9NUV7 552 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 IMPACTQ9P2X3 320 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 DEC1Q9P2X7 70 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MYO1AQ9UBC5 1043 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 MYO15AQ9UKN7 3530 aa13.31□□□□□ -0.28
SRSF3-201ENST00000339436 TMEM191CA6NGB0 347 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 F5H5T6 163 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 TSPAN3O60637 253 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 KAT7O95251 611 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 CYP1A2P05177 515 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 TACR2P21452 398 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 AVPR2P30518 371 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 GGCXP38435 758 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 GALCP54803 685 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 RPS24P62847 133 aaKnown RBP13.3□□□□□ -0.28
SRSF3-201ENST00000339436 GRAMD4Q6IC98 578 aa13.3□□□□□ -0.28
SRSF3-201ENST00000339436 Q6ZS52 159 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms