RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 COX4I1P13073 169 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 NCF2P19878 526 aaPredicted RBP18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 LIG4P49917 911 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 C6orf52Q5T4I8 152 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 GPAT2Q6NUI2 795 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 C16orf46Q6P387 395 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 CAND1Q86VP6 1230 aaKnown RBP18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 WDTC1Q8N5D0 677 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 ZNF513Q8N8E2 541 aaPredicted RBP18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 CATSPER1Q8NEC5 780 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 FAM96AQ9H5X1 160 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 TBCCD1Q9NVR7 557 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 RIMS3Q9UJD0 308 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 EMCNQ9ULC0 261 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 PADI4Q9UM07 663 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 TMEM221A6NGB7 291 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 ALOX15P16050 662 aaPredicted RBP18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 PRDX6P30041 224 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 NOMO1Q15155 1222 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 VWA5B1Q5TIE3 1220 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 LRRC8BQ6P9F7 803 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 UNC5AQ6ZN44 842 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 ATG14Q6ZNE5 492 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 AMIGO2Q86SJ2 522 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 TMEM126BQ8IUX1 230 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 SORT1Q99523 831 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 FRMD8Q9BZ67 464 aaPredicted RBP18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 ARHGEF38Q9NXL2 777 aa18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 GNEQ9Y223 722 aaKnown RBP18.63■□□□□ 0.57
CLSTN3-202ENST00000331148 FAM159BA6NKW6 160 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 CCNE2O96020 404 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 SERPINE1P05121 402 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 CPA3P15088 417 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 KCNA4P22459 653 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 GJA5P36382 358 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 CDKL1Q00532 357 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 TAF5Q15542 800 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 ADRM1Q16186 407 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 TRMT10BQ6PF06 316 aaKnown RBP18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 DNERQ8NFT8 737 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 PPP4R1Q8TF05 950 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 CALN1Q9BXU9 219 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 ZNF518BQ9C0D4 1074 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 RRAGCQ9HB90 399 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 XPNPEP1Q9NQW7 623 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 STK39Q9UEW8 545 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 PCSK1NQ9UHG2 260 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 TCEAL9Q9UHQ7 104 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 PACSIN3Q9UKS6 424 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 ZNF195O14628 629 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 DCXO43602 365 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 SERPINB9P50453 376 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 FAXCQ5TGI0 409 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 SCARA3Q6AZY7 606 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 TIFABQ6ZNK6 161 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 ADCY4Q8NFM4 1077 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 HSPH1Q92598 858 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 TRIM56Q9BRZ2 755 aaKnown RBP18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 RTKNQ9BST9 563 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 FAIMQ9NVQ4 179 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 RBAKQ9NYW8 714 aaPredicted RBP18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 PAK5Q9P286 719 aa18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 RSL24D1Q9UHA3 163 aaKnown RBP18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 AGO2Q9UKV8 859 aaKnown RBP18.62■□□□□ 0.57
CLSTN3-202ENST00000331148 SLC15A5A6NIM6 579 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 WDR64B1ANS9 1081 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 E9PBE3 544 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 KRT3P12035 628 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 VARSP26640 1264 aaKnown RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 HSPA13P48723 471 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CD97P48960 835 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 JAK3P52333 1124 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 MRPS22P82650 360 aaKnown RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 KRT76Q01546 638 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 STXBP5Q5T5C0 1151 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 N4BP2L1Q5TBK1 243 aaPredicted RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 ERI1Q8IV48 349 aaKnown RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 BBS5Q8N3I7 341 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 OR5B17Q8NGF7 314 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 ZBTB14O43829 449 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 SUPT3HO75486 399 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CNMDO75829 334 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 RGS20O76081 388 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 SFNP31947 248 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CDH5P33151 784 aaPredicted RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 PCLAFQ15004 111 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 ZNF394Q53GI3 561 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 SMYD1Q8NB12 490 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CMASQ8NFW8 434 aaPredicted RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 GSDMBQ8TAX9 411 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CDHR1Q96JP9 859 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 CEP170P1Q96L14 293 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 SLC2A11Q9BYW1 496 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 RBPJLQ9UBG7 517 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 ZNF232Q9UNY5 417 aa18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 TDRKHQ9Y2W6 561 aaKnown RBP18.61■□□□□ 0.57
CLSTN3-202ENST00000331148 A0A1B0GTW7 788 aa18.6■□□□□ 0.57
CLSTN3-202ENST00000331148 H7C0C1 242 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms