RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ATP6V1G1O75348 118 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CRTAMO95727 393 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 RGS2P41220 211 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 RPL5P46777 297 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 HNRNPDQ14103 355 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 MAP3K21Q5TCX8 1036 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 NUDT18Q6ZVK8 323 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 FBXW8Q8N3Y1 598 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CDRT15Q96T59 188 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 RSAD1Q9HA92 442 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SEPT10Q9P0V9 454 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 BTBD7Q9P203 1132 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PAK5Q9P286 719 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PSAT1Q9Y617 370 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SF3B1O75533 1304 aaKnown RBP eCLIP8.11□□□□□ -1.11
VMA21-201ENST00000330374 SMIM31A0A1B0GVY4 71 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CCDC78A2IDD5 438 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ZBTB14O43829 449 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 HSPA4LO95757 839 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 LSM8O95777 96 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 FGF3P11487 239 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 COX4I1P13073 169 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ALDH1B1P30837 517 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ADARP55265 1226 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 YWHAEP62258 255 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 TAP1Q03518 808 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 TUBB3Q13509 450 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 NOMO1Q15155 1222 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ZBTB46Q86UZ6 589 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 RXFP2Q8WXD0 754 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CMTM5Q96DZ9 223 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 HSPBAP1Q96EW2 488 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 LENG8Q96PV6 779 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 TXNDC16Q9P2K2 825 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 FZD1Q9UP38 647 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CCNT2O60583 730 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 DNAJA2O60884 412 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SPAG6O75602 509 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 TYK2P29597 1187 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CRHR1P34998 444 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PTPN7P35236 360 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PTGER2P43116 358 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ZNF132P52740 706 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 TGFB2P61812 414 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 HPCAP84074 193 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PDE1CQ14123 709 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 FLOT2Q14254 428 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 TBCCQ15814 346 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 CA9Q16790 459 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SLC9B1Q4ZJI4 515 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 FAM91A1Q658Y4 838 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 MBLAC2Q68D91 279 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 XYLT1Q86Y38 959 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 PQLC1Q8N2U9 271 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 GSDMBQ8TAX9 411 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 HEXIM2Q96MH2 286 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 PRICKLE1Q96MT3 831 aaPredicted RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 TWNKQ96RR1 684 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 TMEM216Q9P0N5 145 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 DNAJB4Q9UDY4 337 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 ARHGAP26Q9UNA1 814 aa8.11□□□□□ -1.11
VMA21-201ENST00000330374 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
VMA21-201ENST00000330374 H3BNX3 289 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 CHADO15335 359 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 CSPG5O95196 566 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 CHRNA5P30532 468 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 CCR10P46092 362 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ACBD5Q5T8D3 534 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 TSHZ1Q6ZSZ6 1077 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 SNX32Q86XE0 403 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 RTKN2Q8IZC4 609 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 PLD5Q8N7P1 536 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 MIPOL1Q8TD10 442 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 UNKQ9C0B0 810 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 C1orf21Q9H246 121 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 DHX35Q9H5Z1 703 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 RNF146Q9NTX7 359 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 A0A0J9YVX5 310 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 FOXD2O60548 495 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 C1QAP02745 245 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ERVK-10P10266 1014 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 RALBP11234 206 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 DESP17661 470 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 XRCC1P18887 633 aaPredicted RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 EIF4BP23588 611 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 TMEM62Q0P6H9 643 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 OLIG2Q13516 323 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 DUOXA2Q1HG44 320 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 SLFN12LQ6IEE8 588 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 TRIM67Q6ZTA4 783 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ACTRT2Q8TDY3 377 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 PXYLP1Q8TE99 480 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 ATP2A3Q93084 1043 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 TMA16Q96EY4 203 aaKnown RBP8.1□□□□□ -1.11
VMA21-201ENST00000330374 FAM210AQ96ND0 272 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 OR52B2Q96RD2 323 aa8.1□□□□□ -1.11
VMA21-201ENST00000330374 PHOX2BQ99453 314 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms