RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TIMM44O43615 452 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 GP1BAP07359 652 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 MLLT3P42568 568 aaPredicted RBP15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 SLC12A3P55017 1021 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 KCNJ12Q14500 433 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 NCAPHQ15003 741 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 TBR1Q16650 682 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 USP30Q70CQ3 517 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 TMC6Q7Z403 805 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 SLC25A45Q8N413 288 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 OR4C6Q8NH72 309 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 GRAMD1AQ96CP6 724 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 ATXN7L3BQ96GX2 97 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 CDK5RAP3Q96JB5 506 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 SERAC1Q96JX3 654 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 TMEM245Q9H330 911 aa15.51■□□□□ 0.07
CTHRC1-201ENST00000330295 COL27A1Q8IZC6 1860 aaPredicted RBP15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 FAM92AA1XBS5 289 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 PMS2P1A4D2B8 440 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 CLDN5O00501 218 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 SYT1P21579 422 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 CASRP41180 1078 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 PGFP49763 221 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 SLC5A3P53794 718 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 FNDC3BQ53EP0 1204 aaKnown RBP15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 ARSHQ5FYA8 562 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 ZNF776Q68DI1 518 aaPredicted RBP15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 FOXR1Q6PIV2 292 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 KCTD17Q8N5Z5 321 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 GANCQ8TET4 914 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 KCNK16Q96T55 309 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 MMTAG2Q9BU76 263 aaKnown RBP15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 ZSCAN16Q9H4T2 348 aaPredicted RBP15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 PRSS16Q9NQE7 514 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 ODF2LQ9ULJ1 636 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 NME7Q9Y5B8 376 aa15.5■□□□□ 0.07
CTHRC1-201ENST00000330295 LRRC72A6NJI9 287 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 PTPN1P18031 435 aaKnown RBP15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 ELAVL4P26378 380 aaKnown RBP15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 ATP5C1P36542 298 aaKnown RBP15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 GTF2BQ00403 316 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 ZRSR1Q15695 479 aaKnown RBP15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 BRSK2Q8IWQ3 736 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 MYCT1Q8N699 235 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 MFSD2AQ8NA29 543 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 OR2T34Q8NGX1 318 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 MAPK15Q8TD08 544 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 POMGNT1Q8WZA1 660 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 HPDLQ96IR7 371 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 PABPC3Q9H361 631 aaKnown RBP15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 FBXL12Q9NXK8 326 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 CLEC4EQ9ULY5 219 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 ENTPD2Q9Y5L3 495 aa15.49■□□□□ 0.07
CTHRC1-201ENST00000330295 VWA3AA6NCI4 1184 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 C10orf142B7Z368 130 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 SLC26A4O43511 780 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 STX6O43752 255 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 TNFSF15O95150 251 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 PLA2G4BP0C869 781 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 THEGLP0DJG4 465 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 ABCD1P33897 745 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 GNL1P36915 607 aaPredicted RBP15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 CCR5P51681 352 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 SRSF6Q13247 344 aaKnown RBP15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 CLCA4Q14CN2 919 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 CYB5D2Q8WUJ1 264 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 AK8Q96MA6 479 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 REEP2Q9BRK0 252 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 B3GNT5Q9BYG0 378 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 MTMR12Q9C0I1 747 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 SNX25Q9H3E2 840 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 PARVGQ9HBI0 331 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 CYLDQ9NQC7 956 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 COMMD8Q9NX08 183 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 SERGEFQ9UGK8 458 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 SCML1Q9UN30 329 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 PLA2G4CQ9UP65 541 aa15.48■□□□□ 0.07
CTHRC1-201ENST00000330295 FFAR2O15552 330 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 FAM13AO94988 1023 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 ITGA2BP08514 1039 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 CHKAP35790 457 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 UBA7P41226 1012 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 RASSF8Q8NHQ8 419 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 WDR36Q8NI36 951 aaKnown RBP15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 FIZ1Q96SL8 496 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 MRPL45Q9BRJ2 306 aaKnown RBP15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 FAM213AQ9BRX8 229 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 ADNPQ9H2P0 1102 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 IKZF4Q9H2S9 585 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 DPEP3Q9H4B8 488 aa15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 TLR8Q9NR97 1041 aaKnown RBP15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 R3HCC1Q9Y3T6 440 aaKnown RBP15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 ZFC3H1O60293 1989 aaKnown RBP15.47■□□□□ 0.07
CTHRC1-201ENST00000330295 LRRK1Q38SD2 2015 aa15.46■□□□□ 0.07
CTHRC1-201ENST00000330295 CSMD1Q96PZ7 3565 aa15.46■□□□□ 0.07
CTHRC1-201ENST00000330295 NOBOXO60393 691 aa15.46■□□□□ 0.07
CTHRC1-201ENST00000330295 MAGEC1O60732 1142 aa15.46■□□□□ 0.07
CTHRC1-201ENST00000330295 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms