RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 GJA9P57773 515 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 WDTC1Q8N5D0 677 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 PCDH19Q8TAB3 1148 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 L3MBTL1Q9Y468 752 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 NCF1BA6NI72 391 aaPredicted RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 NCF1CA8MVU1 366 aaPredicted RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 CNMDO75829 334 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 GFAPP14136 432 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 NCF1P14598 390 aaPredicted RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 PLIN5Q00G26 463 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 GRAMD1BQ3KR37 738 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 C16orf59Q7L2K0 433 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 PIK3R5Q8WYR1 880 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 HACD3Q9P035 362 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 PACSIN3Q9UKS6 424 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 TMEM63AO94886 807 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 STBD1O95210 358 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 PGM1P36871 562 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 NME5P56597 212 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 MRPS5P82675 430 aaKnown RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 VEPH1Q14D04 833 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 ZNF792Q3KQV3 632 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 LRRC38Q5VT99 294 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 CMC1Q7Z7K0 106 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 UNC93AQ86WB7 457 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 PPHLN1Q8NEY8 458 aaKnown RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 PRCCQ92733 491 aaPredicted RBP16.47■□□□□ 0.23
SYNM-201ENST00000328642 P2RY11Q96G91 374 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 CSPG4P5Q96PW8 444 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 CATSPERBQ9H7T0 1116 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 NDFIP2Q9NV92 336 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 GABRQQ9UN88 632 aa16.47■□□□□ 0.23
SYNM-201ENST00000328642 CCL22O00626 93 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 SH3BP5O60239 455 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 CKMP06732 381 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 NFKB1P19838 968 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 CCR1P32246 355 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 SLC8A1P32418 973 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 HTRA3P83110 453 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 N4BP2L1Q5TBK1 243 aaPredicted RBP16.46■□□□□ 0.23
SYNM-201ENST00000328642 KLC3Q6P597 504 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 TNS4Q8IZW8 715 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 CFAP52Q8N1V2 620 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 PAAF1Q9BRP4 392 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 LHX5Q9H2C1 402 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 ADAMTS5Q9UNA0 930 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 MFSD11O43934 449 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 LGR5O75473 907 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 RPL17P18621 184 aaKnown RBP16.46■□□□□ 0.23
SYNM-201ENST00000328642 MATKP42679 507 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 SLC45A4Q5BKX6 768 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 RAP1GAP2Q684P5 730 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 DDIASQ8IXT1 998 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 SLC26A7Q8TE54 656 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 ZNF75CPQ92670 426 aaPredicted RBP16.46■□□□□ 0.23
SYNM-201ENST00000328642 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
SYNM-201ENST00000328642 DNAJC16Q9Y2G8 782 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 C2CD4BA6NLJ0 364 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 E5RI56 91 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 ITGAVP06756 1048 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 AFF1P51825 1210 aaKnown RBP16.46■□□□□ 0.23
SYNM-201ENST00000328642 PRPF39Q86UA1 669 aaKnown RBP16.46■□□□□ 0.23
SYNM-201ENST00000328642 LMNTD2Q8IXW0 634 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 PHF21BQ96EK2 531 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 SH3GL2Q99962 352 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 GRID1Q9ULK0 1009 aa16.46■□□□□ 0.23
SYNM-201ENST00000328642 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 ARL5CA6NH57 179 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 NUDT17P0C025 328 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 ENO3P13929 434 aaPredicted RBP16.45■□□□□ 0.22
SYNM-201ENST00000328642 SERPINB4P48594 390 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 SLC1A5Q15758 541 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 LRRC52Q8N7C0 313 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 SNX27Q96L92 541 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 MAGEB18Q96M61 343 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 DUSP16Q9BY84 665 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 E9PBE3 544 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 KLHL41O60662 606 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 ZWINTO95229 277 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 F9P00740 461 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 PIGRP01833 764 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 DEFB115Q30KQ5 88 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 NAPEPLDQ6IQ20 393 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 CYB5D1Q6P9G0 228 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 ASIC4Q96FT7 647 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 CAB39LQ9H9S4 337 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 IL1RL2Q9HB29 575 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 ADA2Q9NZK5 511 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 CHUKO15111 745 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 UGT1A9O60656 530 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 DNAJC6O75061 913 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 SERPINB3P29508 390 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 AXLP30530 894 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 CERCAMQ5T4B2 595 aa16.45■□□□□ 0.22
SYNM-201ENST00000328642 GDF6Q6KF10 455 aaPredicted RBP16.45■□□□□ 0.22
SYNM-201ENST00000328642 TRMT10BQ6PF06 316 aaKnown RBP16.45■□□□□ 0.22
SYNM-201ENST00000328642 PACS2Q86VP3 889 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms