RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 GNASQ5JWF2 1037 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 LPCAT4Q643R3 524 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 PMF1Q6P1K2 205 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 COLGALT1Q8NBJ5 622 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 TFB1MQ8WVM0 346 aaKnown RBP10.83□□□□□ -0.68
COL3A1-202ENST00000317840 MCRS1Q96EZ8 462 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 PANX3Q96QZ0 392 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 ECSITQ9BQ95 431 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-202ENST00000317840 VCX3AQ9NNX9 186 aa10.83□□□□□ -0.68
COL3A1-202ENST00000317840 RFPL1O75677 317 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 DHRS4L1P0CG22 281 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 SERPINB5P36952 375 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 MRPS5P82675 430 aaKnown RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 LAMC2Q13753 1193 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 TBCCQ15814 346 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 PPP1R26Q5T8A7 1209 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 PDPK2PQ6A1A2 396 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 CAND1Q86VP6 1230 aaKnown RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ICA1LQ8NDH6 482 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 REPS2Q8NFH8 660 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ZNF669Q96BR6 464 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 PARK7Q99497 189 aaKnown RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 CYP3A43Q9HB55 503 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 USP29Q9HBJ7 922 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ACSS2Q9NR19 701 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 SIPA1L1O43166 1804 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 KCNK1O00180 336 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ITM2AO43736 263 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 FKBP6O75344 327 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 LYNP07948 512 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 TGFB3P10600 412 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ETS2P15036 469 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ZFXP17010 805 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 CELF3Q5SZQ8 465 aaKnown RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 PLEKHH3Q7Z736 793 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 RNF148Q8N7C7 305 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 LRRC39Q96DD0 335 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 APOL2Q9BQE5 337 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 SERPINE1P05121 402 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 F7P08709 466 aaPredicted RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ACTR3P61158 418 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ROR2Q01974 943 aaKnown RBP10.82□□□□□ -0.68
COL3A1-202ENST00000317840 USP4Q13107 963 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 DCAF6Q58WW2 860 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 FSCBQ5H9T9 825 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 CMC1Q7Z7K0 106 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ZNF354CQ86Y25 554 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 C10orf107Q8IVU9 208 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 HACE1Q8IYU2 909 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ZNF276Q8N554 614 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 HTR3CQ8WXA8 447 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 RNF34Q969K3 372 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 LRGUKQ96M69 825 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 ZNF180Q9UJW8 692 aa10.82□□□□□ -0.68
COL3A1-202ENST00000317840 GAS2O43903 313 aaKnown RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 FESP07332 822 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TCN1P20061 433 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 CRHR1P34998 444 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 SLC6A3Q01959 620 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 WASHC5Q12768 1159 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TBL3Q12788 808 aaKnown RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 MAP3K21Q5TCX8 1036 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 KYAT3Q6YP21 454 aaKnown RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TSHZ1Q6ZSZ6 1077 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 PPP2R3CQ969Q6 453 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 MAGEB5Q9BZ81 275 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 SNX25Q9H3E2 840 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 XPNPEP3Q9NQH7 507 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 KRT82Q9NSB4 513 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TLK1Q9UKI8 766 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 F8W8V4 182 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 LGALS2P05162 132 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 POLBP06746 335 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 CPA3P15088 417 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 RAG1P15918 1043 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 AKAP5P24588 427 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 GSTT1P30711 240 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 GMPRP36959 345 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 NUDT2P50583 147 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 CDC16Q13042 620 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 UBR7Q8N806 425 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 GDPD5Q8WTR4 605 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TBCBQ99426 244 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 NMRK2Q9NPI5 230 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 BFARQ9NZS9 450 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 DCDC2Q9UHG0 476 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 ZNF112Q9UJU3 913 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TNFSF13BQ9Y275 285 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 GOLGA8TH3BQL2 631 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 KLF11O14901 512 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 ENO3P13929 434 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 GOT1P17174 413 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 MSX2P35548 267 aaPredicted RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 MAP7Q14244 749 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 TARBP2Q15633 366 aaKnown RBP10.81□□□□□ -0.68
COL3A1-202ENST00000317840 DHDDSQ86SQ9 333 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 HPS6Q86YV9 775 aa10.81□□□□□ -0.68
COL3A1-202ENST00000317840 APLFQ8IW19 511 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms