RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 TMEM35BQ8NCS4 154 aa12.64□□□□□ -0.39
ABCD3-201ENST00000315713 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
ABCD3-201ENST00000315713 DEFB124Q8NES8 71 aa12.64□□□□□ -0.39
ABCD3-201ENST00000315713 EPS8L1Q8TE68 723 aa12.64□□□□□ -0.39
ABCD3-201ENST00000315713 ZDHHC4Q9NPG8 344 aa12.64□□□□□ -0.39
ABCD3-201ENST00000315713 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
ABCD3-201ENST00000315713 CKAP5Q14008 2032 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 SLC12A8A0AV02 714 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 SGK1O00141 431 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 CAPN9O14815 690 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 PAPSS1O43252 624 aaPredicted RBP12.63□□□□□ -0.39
ABCD3-201ENST00000315713 ABCB7O75027 752 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 MMEP08473 750 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 CCDC172P0C7W6 258 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 CEACAM1P13688 526 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 CSRP1P21291 193 aaKnown RBP12.63□□□□□ -0.39
ABCD3-201ENST00000315713 TIE1P35590 1138 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 MAPK8P45983 427 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 SLC6A11P48066 632 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 COG7P83436 770 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 TRIM61Q5EBN2 209 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 BBS7Q8IWZ6 715 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 TMEFF1Q8IYR6 380 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 FRMD1Q8N878 549 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 IL17RCQ8NAC3 791 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
ABCD3-201ENST00000315713 TXNDC5Q8NBS9 432 aaKnown RBP12.63□□□□□ -0.39
ABCD3-201ENST00000315713 CCDC26Q8TAB7 109 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 OLIG1Q8TAK6 271 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 GATA6Q92908 595 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 CPXM1Q96SM3 734 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 TRIM62Q9BVG3 475 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
ABCD3-201ENST00000315713 IFNKQ9P0W0 207 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 SFMBT1Q9UHJ3 866 aa12.63□□□□□ -0.39
ABCD3-201ENST00000315713 MBD1Q9UIS9 605 aaPredicted RBP12.63□□□□□ -0.39
ABCD3-201ENST00000315713 FAM170AA1A519 330 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 ADAM23O75077 832 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 TPM3P06753 285 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 NCAM1P13591 858 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
ABCD3-201ENST00000315713 FERP16591 822 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 PTGER3P43115 390 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 ZNF445P59923 1031 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 MRPS21P82921 87 aaKnown RBP12.62□□□□□ -0.39
ABCD3-201ENST00000315713 CDR2Q01850 454 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 DHCR24Q15392 516 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 OR6B2Q6IFH4 312 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 HTR3DQ70Z44 454 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 ERICH1Q86X53 443 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 MSANTD4Q8NCY6 345 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 SLC20A1Q8WUM9 679 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 HMGB4Q8WW32 186 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 WBP2Q969T9 261 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 SPACA7Q96KW9 195 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 BCCIPQ9P287 314 aaKnown RBP eCLIP12.62□□□□□ -0.39
ABCD3-201ENST00000315713 EVLQ9UI08 416 aaPredicted RBP12.62□□□□□ -0.39
ABCD3-201ENST00000315713 NOCTQ9UK39 431 aaKnown RBP12.62□□□□□ -0.39
ABCD3-201ENST00000315713 KNL1Q8NG31 2342 aa12.62□□□□□ -0.39
ABCD3-201ENST00000315713 GOLGA4Q13439 2230 aaKnown RBP12.61□□□□□ -0.39
ABCD3-201ENST00000315713 NUMA1Q14980 2115 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 TCRBV21S2A2A0A5A6 115 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 LRRC53A6NM62 1247 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 CBFA2T2O43439 604 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 STC2O76061 302 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ALDH1A2O94788 518 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 KAT7O95251 611 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 LSM8O95777 96 aaKnown RBP12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ADH1CP00326 375 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ERBB2P04626 1255 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 APODP05090 189 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ADH5P11766 374 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 CORO1AP31146 461 aaKnown RBP12.61□□□□□ -0.39
ABCD3-201ENST00000315713 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
ABCD3-201ENST00000315713 P2RY2P41231 377 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 PTPN20Q4JDL3 420 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 EFHC1Q5JVL4 640 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 EMC10Q5UCC4 262 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 NAA35Q5VZE5 725 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 FAM183BPQ6ZVS7 135 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 LPCAT2Q7L5N7 544 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ADGRG2Q8IZP9 1017 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ZCCHC14Q8WYQ9 949 aaKnown RBP12.61□□□□□ -0.39
ABCD3-201ENST00000315713 PLD4Q96BZ4 506 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 PNKPQ96T60 521 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 DCLK3Q9C098 648 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 POPDC2Q9HBU9 364 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 ARHGEF4Q9NR80 690 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 TMEM74BQ9NUR3 256 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
ABCD3-201ENST00000315713 NAALADL1Q9UQQ1 740 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms