RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PAFAH2Q99487 392 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 ZCWPW1Q9H0M4 648 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 TRABDQ9H4I3 376 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 TCRBV9S1A1TA0A576 114 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 TADA2AO75478 443 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 TPSB2P20231 275 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 HCAR3P49019 387 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 GLUD2P49448 558 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 SEMA5AQ13591 1074 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 TPSAB1Q15661 275 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 ADGRD1Q6QNK2 874 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 DYDC1Q8WWB3 177 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 CEP41Q9BYV8 373 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 ABI2Q9NYB9 513 aaPredicted RBP18.94■□□□□ 0.62
CCDC43-201ENST00000315286 OR12D3Q9UGF7 316 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 VWA8A3KMH1 1905 aa18.94■□□□□ 0.62
CCDC43-201ENST00000315286 A0A1W2PPM1 405 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 F5H423 210 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-201ENST00000315286 RNF103O00237 685 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 SPAG7O75391 227 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 MYCP01106 439 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-201ENST00000315286 GRIA1P42261 906 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 PRMT2P55345 433 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 HTRA3P83110 453 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 BFSP2Q13515 415 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 PLEKHG4Q58EX7 1191 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 SRLQ86TD4 932 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 SCN4BQ8IWT1 228 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 LRRC34Q8IZ02 419 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 COLGALT1Q8NBJ5 622 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 CFAP36Q96G28 342 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 CYTH2Q99418 400 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 UNC93B1Q9H1C4 597 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 RRP15Q9Y3B9 282 aaKnown RBP18.93■□□□□ 0.62
CCDC43-201ENST00000315286 ANKRD65E5RJM6 399 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 PPP1R12AO14974 1030 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-201ENST00000315286 IGLV3-25P01717 112 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 COL6A1P12109 1028 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 MSH2P43246 934 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 MAGEA3P43357 314 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 GATMP50440 423 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 WASHC5Q12768 1159 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 EIF4EBP2Q13542 120 aaPredicted RBP18.93■□□□□ 0.62
CCDC43-201ENST00000315286 BEND5Q7L4P6 421 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 TAX1BP1Q86VP1 789 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 DCAKDQ8WVC6 231 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 RNF34Q969K3 372 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 SEPT10Q9P0V9 454 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 TRIM17Q9Y577 477 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 PCDHB7Q9Y5E2 793 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 FAM169AQ9Y6X4 670 aa18.93■□□□□ 0.62
CCDC43-201ENST00000315286 FAM47DPA6NHR8 397 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 VARS2Q5ST30 1063 aaKnown RBP18.92■□□□□ 0.62
CCDC43-201ENST00000315286 SCD5Q86SK9 330 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 DCP1BQ8IZD4 617 aaKnown RBP18.92■□□□□ 0.62
CCDC43-201ENST00000315286 ABI1Q8IZP0 508 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 C4orf33Q8N1A6 199 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 NPWQ8N729 165 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 STKLD1Q8NE28 680 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 GDAP1Q8TB36 358 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 SEC16BQ96JE7 1060 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 TRIM62Q9BVG3 475 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 ELAC1Q9H777 363 aaKnown RBP18.92■□□□□ 0.62
CCDC43-201ENST00000315286 PLAC1Q9HBJ0 212 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 ABCC13Q9NSE7 274 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 NKIRAS1Q9NYS0 192 aa18.92■□□□□ 0.62
CCDC43-201ENST00000315286 ZC3H7BQ9UGR2 993 aaKnown RBP18.92■□□□□ 0.62
CCDC43-201ENST00000315286 DNM1LO00429 736 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 OPHN1O60890 802 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 SPAG6O75602 509 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 STK10O94804 968 aaKnown RBP18.91■□□□□ 0.62
CCDC43-201ENST00000315286 LRIG2O94898 1065 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 VIMP08670 466 aaKnown RBP18.91■□□□□ 0.62
CCDC43-201ENST00000315286 FDFT1P37268 417 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 TCTN1Q2MV58 587 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 KBTBD12Q3ZCT8 623 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 SDHAF4Q5VUM1 108 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 BTBD8Q5XKL5 378 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 PDZD4Q76G19 769 aaPredicted RBP18.91■□□□□ 0.62
CCDC43-201ENST00000315286 PRPF39Q86UA1 669 aaKnown RBP18.91■□□□□ 0.62
CCDC43-201ENST00000315286 CEP57Q86XR8 500 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 SIGLEC10Q96LC7 697 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 CASD1Q96PB1 797 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 SMC6Q96SB8 1091 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 EPAS1Q99814 870 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 SENP1Q9P0U3 644 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 EPHB2P29323 1055 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 ZNF567Q8N184 647 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 MPP5Q8N3R9 675 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 MZB1Q8WU39 189 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 CKAP2Q8WWK9 683 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 LRRC39Q96DD0 335 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 FERMT1Q9BQL6 677 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 NMUR1Q9HB89 426 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 SFMBT1Q9UHJ3 866 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 TTLL3Q9Y4R7 772 aa18.91■□□□□ 0.62
CCDC43-201ENST00000315286 KCNK1O00180 336 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 SYN3O14994 580 aa18.9■□□□□ 0.62
CCDC43-201ENST00000315286 PRPF4O43172 522 aaKnown RBP eCLIP18.9■□□□□ 0.62
CCDC43-201ENST00000315286 IRAK2O43187 625 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms