RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SLC26A9Q7LBE3 791 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 DUSP16Q9BY84 665 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 MAF1Q9H063 256 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CDHR5Q9HBB8 845 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 FAM237BA0A1B0GVD1 139 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ZBTB48P10074 688 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 PRKAR2AP13861 404 aaKnown RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 GP5P40197 560 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ITGA9Q13797 1035 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SLC35B2Q8TB61 432 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CLEC4CQ8WTT0 213 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 HAPLN2Q9GZV7 340 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SMPD4Q9NXE4 827 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 LSM7Q9UK45 103 aaKnown RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ATP11BQ9Y2G3 1177 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SUPT7LO94864 414 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 NPY2RP49146 381 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 PLD5Q8N7P1 536 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 C12orf50Q8NA57 414 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 DCDC2Q9UHG0 476 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 TRHDEQ9UKU6 1024 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 XPO1O14980 1071 aaKnown RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CYBBP04839 570 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SLC11A2P49281 568 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 RAD51Q06609 339 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ZRANB3Q5FWF4 1079 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 RNF219Q5W0B1 726 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SNX27Q96L92 541 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 MYLK2Q9H1R3 596 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 HMX1Q9NP08 348 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ABCC13Q9NSE7 274 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 NDUFS3O75489 264 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ARMCX1Q9P291 453 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 DSEQ9UL01 958 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 MYBPHLA2RUH7 354 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 F5H5T6 163 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SCAMP3O14828 347 aaKnown RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 FAM155BO75949 473 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 TEKT4Q8WW24 435 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ULK4Q96C45 1275 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CSPG4P5Q96PW8 444 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SLC17A7Q9P2U7 560 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 EFR3BQ9Y2G0 817 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SRRM3A6NNA2 597 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CBX4O00257 560 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 GRK2P25098 689 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ALDH1A3P47895 512 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 SLC25A52Q3SY17 297 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 TIGD7Q6NT04 549 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 UNC5AQ6ZN44 842 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CYP4X1Q8N118 509 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 LPCAT1Q8NF37 534 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 NKD2Q969F2 451 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CROCCQ5TZA2 2017 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 TCRBV9S1A1TA0A576 114 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 AIM2O14862 343 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 CHADO15335 359 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 NCAM2O15394 837 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 RHOCP08134 193 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 TCN1P20061 433 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 OXCT1P55809 520 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 LILRA4P59901 499 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 PSTKQ8IV42 348 aaKnown RBP6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ACSS3Q9H6R3 686 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ADAMTS5Q9UNA0 930 aa6.35□□□□□ -1.39
PRKDC-201ENST00000314191 ALADP13716 330 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 NOMO2Q5JPE7 1267 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 OLFML2BQ68BL8 750 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 FNIP1Q8TF40 1166 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 MYCBPQ99417 103 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 NSMCE4AQ9NXX6 385 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 RRN3Q9NYV6 651 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 TMEM63AO94886 807 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 ATP6V1G2O95670 118 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 PACS2Q86VP3 889 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 SERPINB11Q96P15 392 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 KLHL5Q96PQ7 755 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 Q9H521 79 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 MPP6Q9NZW5 540 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 MFSD11O43934 449 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 HNRNPCL1O60812 293 aaKnown RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 EDF1O60869 148 aaKnown RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 SNAI1O95863 264 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 STMN1P16949 149 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 RHOAP61586 193 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF177Q13360 481 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 MTFR1Q15390 333 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 ZNF792Q3KQV3 632 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 STRADAQ7RTN6 431 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 CINPQ9BW66 212 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 SLC8A2Q9UPR5 921 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 SETD1BQ9UPS6 1966 aaKnown RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 A0A096LPK6 155 aa6.34□□□□□ -1.39
PRKDC-201ENST00000314191 PHGDHO43175 533 aaKnown RBP6.34□□□□□ -1.39
PRKDC-201ENST00000314191 PGAM1P18669 254 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms