RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 CSH1P0DML2 217 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 CSH2P0DML3 217 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 SKIV2L2P42285 1042 aaKnown RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 SNAPC2Q13487 334 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 TMEM63BQ5T3F8 832 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 MAP1SQ66K74 1059 aaPredicted RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 CEP70Q8NHQ1 597 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 ILKAPQ9H0C8 392 aaPredicted RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 LHX5Q9H2C1 402 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 DCDC2Q9UHG0 476 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 UBA6A0AVT1 1052 aaPredicted RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 B3GAT3O94766 335 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 PKNOX1P55347 436 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 NSUN2Q08J23 767 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 KLC3Q6P597 504 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 SLC16A10Q8TF71 515 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 CATSPER2Q96P56 530 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 LRRC40Q9H9A6 602 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 SARS2Q9NP81 518 aaKnown RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 CYTH4Q9UIA0 394 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 PCDHGC3Q9UN70 934 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 ACADSP16219 412 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 ETFBP38117 255 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 TBL3Q12788 808 aaKnown RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 FLOT2Q14254 428 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 ATPAF2Q8N5M1 289 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 FAM193BQ96PV7 902 aaPredicted RBP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 MAGEB5Q9BZ81 275 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 FAM96AQ9H5X1 160 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 VCX3AQ9NNX9 186 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 ARHGAP26Q9UNA1 814 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 GMNNO75496 209 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 ACAP1Q15027 740 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 PARP6Q2NL67 630 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 THEMIS2Q5TEJ8 643 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 LRRC8EQ6NSJ5 796 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 PHACTR1Q9C0D0 580 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 LRCH1Q9Y2L9 728 aa18.88■□□□□ 0.61
CDK5R1-201ENST00000313401 TCEA3O75764 348 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 SEC24DO94855 1032 aaPredicted RBP18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 GPD2P43304 727 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 SV2CQ496J9 727 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 IYDQ6PHW0 289 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 TSHZ1Q6ZSZ6 1077 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 C10orf107Q8IVU9 208 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 EBF4Q9BQW3 602 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 SPON2Q9BUD6 331 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 KCNK4Q9NYG8 393 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 AURKCQ9UQB9 309 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 PLLPQ9Y342 182 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 NFKBIEO00221 500 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 PPEF2O14830 753 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 GP5P40197 560 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 TMCO4Q5TGY1 634 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 C15orf39Q6ZRI6 1047 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 AZIN2Q96A70 460 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 PRR11Q96HE9 360 aaPredicted RBP18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 SERPINE1P05121 402 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 USP17L7P0C7H9 530 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 TPBGLP0DKB5 382 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 GRIK1P39086 918 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 ACVR2BQ13705 512 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 TDRPQ86YL5 185 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 DDIASQ8IXT1 998 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 LRRC43Q8N309 656 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 PCYT2Q99447 389 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 VPS33BQ9H267 617 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 ZNF358Q9NW07 568 aa18.87■□□□□ 0.61
CDK5R1-201ENST00000313401 GOLGA8CPA6NN73 597 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 TFE3P19532 575 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 SLC25A11Q02978 314 aaKnown RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 BIRC2Q13490 618 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 TRMT5Q32P41 509 aaKnown RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 TDRD5Q8NAT2 981 aaKnown RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 DCAKDQ8WVC6 231 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ATP6V1E2Q96A05 226 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ZNF570Q96NI8 536 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ULBP1Q9BZM6 244 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 SYBUQ9NX95 663 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 C2CD4BA6NLJ0 364 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 NAGLUP54802 743 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 WSCD1Q658N2 575 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 DRICH1Q6PGQ1 229 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 LCA5Q86VQ0 697 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 CCDC185Q8N715 623 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 CNBD2Q96M20 576 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 PEBP4Q96S96 227 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 TMPRSS4Q9NRS4 437 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 DDX43Q9NXZ2 648 aaKnown RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 CACNG4Q9UBN1 327 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 A0A0A0MRY4 1105 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 OLIG2Q13516 323 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 TCEAL1Q15170 157 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ACSBG2Q5FVE4 666 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 SLC27A1Q6PCB7 646 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms