RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CHRNB2P17787 502 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 GABRB2P47870 512 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 ID4P47928 161 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 EIF4HQ15056 248 aaKnown RBP15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 CCDC6Q16204 474 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 ZC3H12AQ5D1E8 599 aaKnown RBP15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 MS4A13Q5J8X5 152 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 PRR23CQ6ZRP0 262 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 GPR161Q8N6U8 529 aaKnown RBP15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 SLC20A1Q8WUM9 679 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 HMGB4Q8WW32 186 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 GOLGA1Q92805 767 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 TMA16Q96EY4 203 aaKnown RBP15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 ARRDC1-AS1Q9H2J1 176 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 SMOC1Q9H4F8 434 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 ANLNQ9NQW6 1124 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 ELOVL2Q9NXB9 296 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 INTS6Q9UL03 887 aaKnown RBP15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 PCDHGA5Q9Y5G8 931 aa15.16■□□□□ 0.02
PPP1CA-201ENST00000312989 GDF9O60383 454 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 HSF2BPO75031 334 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 DAB1O75553 588 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 GRAP2O75791 330 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 CYBBP04839 570 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 MMEP08473 750 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 TFE3P19532 575 aaPredicted RBP15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 PRKCHP24723 683 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 CD70P32970 193 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 RPS24P62847 133 aaKnown RBP15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 NOMO3P69849 1222 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 ZNF234Q14588 700 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 FUT11Q495W5 492 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 USP39Q53GS9 565 aaKnown RBP15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 TAF3Q5VWG9 929 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 NUDT18Q6ZVK8 323 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 BNIPLQ7Z465 357 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 DHX40Q8IX18 779 aaKnown RBP15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 NT5C3BQ969T7 300 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 ERLEC1Q96DZ1 483 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 MYO19Q96H55 970 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 MRGPRX1Q96LB2 322 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 MKRN2Q9H000 416 aaKnown RBP15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 TMEM245Q9H330 911 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 FAM207AQ9NSI2 230 aaPredicted RBP15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 ABCB8Q9NUT2 735 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 USP18Q9UMW8 372 aa15.15■□□□□ 0.02
PPP1CA-201ENST00000312989 IGHV1OR15-9A0A0B4J2B8 117 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 BCLAF3A2AJT9 711 aaKnown RBP15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 TBL1XO60907 577 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 ALDH1A2O94788 518 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 CYP1A1P04798 512 aaPredicted RBP15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 ZNF806P0C7X5 589 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 KRT9P35527 623 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 MPLP40238 635 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 SLC11A2P49281 568 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 COPAP53621 1224 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 BPIFB4P59827 614 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 POLR2FP61218 127 aaKnown RBP15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 FMO1Q01740 532 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 SLC6A3Q01959 620 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 LMNB2Q03252 620 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 SF3A2Q15428 464 aaKnown RBP15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 SYCP1Q15431 976 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 RSPO4Q2I0M5 234 aaPredicted RBP15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 C2CD6Q53TS8 623 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 DCAF6Q58WW2 860 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 FSCBQ5H9T9 825 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 XYLT1Q86Y38 959 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 AOPEPQ8N6M6 819 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 ERGIC2Q96RQ1 377 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 NPY6RQ99463 290 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 BPIFA3Q9BQP9 254 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 TRIM62Q9BVG3 475 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 GGA2Q9UJY4 613 aa15.14■□□□□ 0.01
PPP1CA-201ENST00000312989 FAM170AA1A519 330 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 PES1O00541 588 aaKnown RBP15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 CAPN9O14815 690 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 NPC1O15118 1278 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 PABPC1P11940 636 aaKnown RBP15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 SOX5P35711 763 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 SCNN1AP37088 669 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 PTGER3P43115 390 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 IRAK1P51617 712 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 LMAN2Q12907 356 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 PTP4A2Q12974 167 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 ANO6Q4KMQ2 910 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 EFHC1Q5JVL4 640 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 PEAR1Q5VY43 1037 aaPredicted RBP15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 OR6B2Q6IFH4 312 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 TCEAL6Q6IPX3 200 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 HJURPQ8NCD3 748 aaPredicted RBP15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 FIBINQ8TAL6 211 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 WFIKKN2Q8TEU8 576 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 CYB5D2Q8WUJ1 264 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 TCEAL3Q969E4 200 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 TMEM59LQ9UK28 342 aa15.13■□□□□ 0.01
PPP1CA-201ENST00000312989 GFPT2O94808 682 aa15.12■□□□□ 0.01
PPP1CA-201ENST00000312989 LSM8O95777 96 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms