RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FNTBP49356 437 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 DGKGP49619 791 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 MS4A13Q5J8X5 152 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 ACAD10Q6JQN1 1059 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 KIAA1211LQ6NV74 962 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 ZNF677Q86XU0 584 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CPNE8Q86YQ8 564 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 LGI2Q8N0V4 545 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 TERB1Q8NA31 727 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CYB5D2Q8WUJ1 264 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 RNF34Q969K3 372 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 OTUB2Q96DC9 234 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CHP1Q99653 195 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CACNA2D2Q9NY47 1150 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCFD1-201ENST00000311943 MARK1Q9P0L2 795 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 STOML2Q9UJZ1 356 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
SCFD1-201ENST00000311943 GPR179Q6PRD1 2367 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 ZFHX2Q9C0A1 2572 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 KCNU1A8MYU2 1149 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 DCLK1O15075 740 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 PAGE1O75459 146 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 CNTN5O94779 1100 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 KLF8O95600 359 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 CAVIN2O95810 425 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 CXCL12P48061 93 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 CDK17Q00537 523 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 PHF13Q86YI8 300 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 MCOLN2Q8IZK6 566 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 NT5C3BQ969T7 300 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 TMA16Q96EY4 203 aaKnown RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 MCEEQ96PE7 176 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 ABCB8Q9NUT2 735 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 INTS6Q9UL03 887 aaKnown RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 VANGL2Q9ULK5 521 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 HS3ST4Q9Y661 456 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 FAM72CH0Y354 149 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 NCAM2O15394 837 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 SART1O43290 800 aaKnown RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 ABCB4P21439 1286 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 DRD1P21728 446 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 CHKAP35790 457 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 ZNF252P-AS1Q0IIN9 211 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 ALFQ53S48 1182 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 FAM72AQ5TYM5 149 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 FAM72DQ6L9T8 149 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 FAM72BQ86X60 149 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 CACUL1Q86Y37 369 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 VSTM4Q8IW00 320 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 PYROXD2Q8N2H3 581 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 BTBD6Q96KE9 485 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 PRMT1Q99873 361 aaKnown RBP12.49□□□□□ -0.41
SCFD1-201ENST00000311943 PACSIN1Q9BY11 444 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 MYO1AQ9UBC5 1043 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 FBXO10Q9UK96 956 aa12.49□□□□□ -0.41
SCFD1-201ENST00000311943 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-201ENST00000311943 APODP05090 189 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 TCF4P15884 667 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 TACR2P21452 398 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 PRKCIP41743 596 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 GRIA2P42262 883 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 CTSOP43234 321 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-201ENST00000311943 HDAC4P56524 1084 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 DEUP1Q05D60 604 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-201ENST00000311943 RING1Q06587 406 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 FIGNQ5HY92 759 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 GRAMD4Q6IC98 578 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 BNIPLQ7Z465 357 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 CHSY1Q86X52 802 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 APCDD1Q8J025 514 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 CPXM2Q8N436 756 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 CARNMT1Q8N4J0 409 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 ARFGAP1Q8N6T3 406 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 CCDC185Q8N715 623 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCFD1-201ENST00000311943 DCLK3Q9C098 648 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 PRMT8Q9NR22 394 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-201ENST00000311943 ASNSD1Q9NWL6 643 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 MPP6Q9NZW5 540 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 TFR2Q9UP52 801 aa12.48□□□□□ -0.41
SCFD1-201ENST00000311943 CCP110O43303 1012 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 GLI1P08151 1106 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 KRT3P12035 628 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 HLA-EP13747 358 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ZBED6P86452 979 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 AUHQ13825 339 aaKnown RBP12.47□□□□□ -0.41
SCFD1-201ENST00000311943 LRRC32Q14392 662 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 DMC1Q14565 340 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 ARID5BQ14865 1188 aa12.47□□□□□ -0.41
SCFD1-201ENST00000311943 SLC25A52Q3SY17 297 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms