RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 C2CD2LO14523 706 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 GCATO75600 419 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 ANP32DO95626 131 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 CCNB1P14635 433 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 YY1P25490 414 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 ETV4P43268 484 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 CLCNKBP51801 687 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 NEK3P51956 506 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 STRADAQ7RTN6 431 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 ZNF276Q8N554 614 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 E2F7Q96AV8 911 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 PAAF1Q9BRP4 392 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 XAB2Q9HCS7 855 aaKnown RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 PLXNB2O15031 1838 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 EIF4E1BA6NMX2 242 aaKnown RBP11.9□□□□□ -0.51
PTPN2-201ENST00000309660 ATP9BO43861 1147 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 PGK1P00558 417 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 T-ENOLP0DO92 83 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 ERVK-10P10266 1014 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 TSHRP16473 764 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 SESN3P58005 492 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 NBPF20Q3BBV1 942 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 KIAA0319Q5VV43 1072 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 ALYREFQ86V81 257 aaKnown RBP11.9□□□□□ -0.51
PTPN2-201ENST00000309660 FRMD8Q9BZ67 464 aaPredicted RBP11.9□□□□□ -0.51
PTPN2-201ENST00000309660 GDAP2Q9NXN4 497 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 KANSL3Q9P2N6 904 aa11.9□□□□□ -0.51
PTPN2-201ENST00000309660 PPARGC1AQ9UBK2 798 aaKnown RBP11.9□□□□□ -0.51
PTPN2-201ENST00000309660 MYADML2A6NDP7 307 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 RFPL1O75677 317 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 HOXD8P13378 290 aaPredicted RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SAT1P21673 171 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 NOS2P35228 1153 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 RASSF2P50749 326 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SCNN1GP51170 649 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 TPI1P60174 286 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 GPRIN1Q7Z2K8 1008 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 NSMCE1Q8WV22 266 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CENPIQ92674 756 aaPredicted RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SIK2Q9H0K1 926 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 ARL8BQ9NVJ2 186 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 PLLPQ9Y342 182 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 RPS6KL1Q9Y6S9 549 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 POMCP01189 267 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF865P0CJ78 1059 aaPredicted RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 ERCC2P18074 760 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 AXLP30530 894 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CRYBB1P53674 252 aaPredicted RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 RPL10AP62906 217 aaKnown RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SLC18A2Q05940 514 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 PAQR9Q6ZVX9 377 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 USP33Q8TEY7 942 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CDKL2Q92772 493 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 WNT8BQ93098 351 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 PCED1BQ96HM7 432 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CELF6Q96J87 481 aaKnown RBP11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SYBUQ9NX95 663 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 ZFATQ9P243 1243 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 ST3GAL5Q9UNP4 418 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 PSAT1Q9Y617 370 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 CDY2AQ9Y6F7 541 aa11.89□□□□□ -0.51
PTPN2-201ENST00000309660 SDR42E2A6NKP2 422 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 GOLGA8TH3BQL2 631 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 TNPO2O14787 897 aaKnown RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 ENTPD5O75356 428 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 SRGAP2BP0DMP2 458 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 KCNA4P22459 653 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 BZW1Q7L1Q6 419 aaKnown RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF567Q8N184 647 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 MCUQ8NE86 351 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 N4BP2L2Q92802 583 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 MCUR1Q96AQ8 359 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 SLC7A6OSQ96CW6 309 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 HNRNPABQ99729 332 aaKnown RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 FAM124BQ9H5Z6 455 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 CRTAC1Q9NQ79 661 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 PCDHA11Q9Y5I1 949 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 ATP5HO75947 161 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 ESRRAP11474 423 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 KCNE1P15382 129 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 PRKCHP24723 683 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF157P51786 506 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 PDK1Q15118 436 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 PRKD1Q15139 912 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 RWDD4Q6NW29 188 aaKnown RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 LRMDAQ9H2I8 198 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 TPP1O14773 563 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 PPP1R12AO14974 1030 aaPredicted RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 GYG2O15488 501 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms