RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 OLFM3Q96PB7 478 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 CFAP69A5D8W1 941 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 F5H423 210 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 VAV1P15498 845 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 ERCC2P18074 760 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 GCAP28676 217 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 TPI1P60174 286 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 SEMA3BQ13214 749 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 XRCC4Q13426 336 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 TMED2Q15363 201 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 MGARPQ8TDB4 240 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 CASP10Q92851 521 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 ZNF317Q96PQ6 595 aaPredicted RBP23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 QKIQ96PU8 341 aaKnown RBP eCLIP23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 MRPL9Q9BYD2 267 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 CEP41Q9BYV8 373 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 CRISPLD1Q9H336 500 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 ABCC13Q9NSE7 274 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 OR12D3Q9UGF7 316 aa23.18■■□□□ 1.3
PDLIM2-202ENST00000308354 AVILO75366 819 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 DGKIO75912 1065 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 DRD4P21917 467 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 ARL4CP56559 192 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 LRRC14Q15048 493 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 BBS9Q3SYG4 887 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 HEATR6Q6AI08 1181 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 SRRM1Q8IYB3 904 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 TFB1MQ8WVM0 346 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 VWCEQ96DN2 955 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 FUBP3Q96I24 572 aaKnown RBP eCLIP23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 WDR83Q9BRX9 315 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 TMEM39AQ9NV64 488 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 MRPL42Q9Y6G3 142 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 TANC1Q9C0D5 1861 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 TRIM66O15016 1216 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 METTL18O95568 372 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 AIF1P55008 147 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 CORO7P57737 925 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 AP1B1Q10567 949 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 KCNJ11Q14654 390 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 CPLX4Q7Z7G2 160 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 NUP93Q8N1F7 819 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 CCNYQ8ND76 341 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 SIK2Q9H0K1 926 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 ETNK1Q9HBU6 452 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 KCNK9Q9NPC2 374 aa23.17■■□□□ 1.3
PDLIM2-202ENST00000308354 C5orf60A6NFR6 353 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 DCLK1O15075 740 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 BRAFP15056 766 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 FAM117BQ6P1L5 589 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 RNF19BQ6ZMZ0 732 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 LRRC43Q8N309 656 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 HTR3CQ8WXA8 447 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 TBX21Q9UL17 535 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 CLUHO75153 1309 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 POC1B-GALNT4F8VUJ3 575 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 APRTP07741 180 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 GPX6P59796 221 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 ZNF333Q96JL9 665 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 SEPT5Q99719 369 aaPredicted RBP23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 PRDM12Q9H4Q4 367 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 MLXIPLQ9NP71 852 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 PATJQ8NI35 1801 aa23.16■■□□□ 1.3
PDLIM2-202ENST00000308354 OR6C75A6NL08 312 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 PIAS1O75925 651 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 LRIG2O94898 1065 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 IGLV3-25P01717 112 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 SRGAP2BP0DMP2 458 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 SSTR1P30872 391 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 IKBKEQ14164 716 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 MPP2Q14168 576 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 MGAT5BQ3V5L5 792 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 PDIK1LQ8N165 341 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 NPWQ8N729 165 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 ANKRD42Q8N9B4 389 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 FBXO36Q8NEA4 188 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 PYROXD1Q8WU10 500 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 MAML1Q92585 1016 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 C8orf48Q96LL4 319 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 SEPT10Q9P0V9 454 aa23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 FNDC1Q4ZHG4 1894 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-202ENST00000308354 MTMR11A4FU01 709 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 IRAK2O43187 625 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 VNN2O95498 520 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 EPHB2P29323 1055 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 ALDH7A1P49419 539 aaKnown RBP23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 PAFAH1B3Q15102 231 aaKnown RBP23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 SPATS2Q86XZ4 545 aaKnown RBP23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 RIBC1Q8N443 379 aaPredicted RBP23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 MRRFQ96E11 262 aaKnown RBP23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 TMEM175Q9BSA9 504 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 TTPALQ9BTX7 342 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 CCDC134Q9H6E4 229 aa23.14■■□□□ 1.3
PDLIM2-202ENST00000308354 RASA4BC9J798 803 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 RASA4O43374 803 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 GCATO75600 419 aa23.14■■□□□ 1.29
PDLIM2-202ENST00000308354 RPL17P18621 184 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms