RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FYB2Q5VWT5 728 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RAP1GAP2Q684P5 730 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FSTL4Q6MZW2 842 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 WDR59Q6PJI9 974 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 STRADAQ7RTN6 431 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SYNPOQ8N3V7 929 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 JOSD2Q8TAC2 188 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FAM172AQ8WUF8 416 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PRRX2Q99811 253 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TKTL2Q9H0I9 626 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ISCUQ9H1K1 167 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 RBM12Q9NTZ6 932 aaKnown RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PIGVQ9NUD9 493 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SPATA6Q9NWH7 488 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ZNF318Q5VUA4 2279 aa11.4□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GOLGA6L7A0A1B0GV03 622 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TBC1D3BA6NDS4 549 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SHISA7A6NL88 538 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TBL1XO60907 577 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RNF40O75150 1001 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 KAT7O95251 611 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ADCY5O95622 1261 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TFE3P19532 575 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TACR2P21452 398 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PSMA2P25787 234 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SLC6A4P31645 630 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RFC1P35251 1148 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SLC6A11P48066 632 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CXCR3P49682 368 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GFPT1Q06210 699 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 EIF4EBP2Q13542 120 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CDH18Q13634 790 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCINQ13939 588 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 GAB4Q2WGN9 574 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MS4A13Q5J8X5 152 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PIK3R6Q5UE93 754 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 OTUD1Q5VV17 481 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NADSYN1Q6IA69 706 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PLEKHA7Q6IQ23 1121 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TRNP1Q6NT89 227 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RFWD3Q6PCD5 774 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 FAM131BQ86XD5 332 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 DNAAF5Q86Y56 855 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MFN1Q8IWA4 741 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ETFBKMTQ8IXQ9 262 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LGI2Q8N0V4 545 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TERB1Q8NA31 727 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 DTWD2Q8NBA8 298 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CTNNBL1Q8WYA6 563 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NT5C3BQ969T7 300 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ACDQ96AP0 544 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CLDN23Q96B33 292 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CHRDQ9H2X0 955 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NHEJ1Q9H9Q4 299 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ARHGEF38Q9NXL2 777 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 STIM2Q9P246 746 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 NYNRINQ9P2P1 1898 aaKnown RBP11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TCRBV5S1A1TA0A578 114 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCP110O43303 1012 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LAMTOR5O43504 91 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ATG13O75143 517 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PAGE1O75459 146 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RNF8O76064 485 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 HOXD9P28356 352 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CYLC1P35663 651 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCR3P51677 355 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ZNF143P52747 638 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SEC13P55735 322 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RPL7AP62424 266 aaKnown RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MAMLD1Q13495 774 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 E2F5Q15329 346 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CCDC14Q49A88 953 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PPP1R15BQ5SWA1 713 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 C10orf76Q5T2E6 689 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 MPP7Q5T2T1 576 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LRRC31Q6UY01 552 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 ANKS1BQ7Z6G8 1248 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 TC2NQ8N9U0 490 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SPC24Q8NBT2 197 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 UCMAQ8WVF2 138 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 PRICKLE1Q96MT3 831 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 RPRD1AQ96P16 312 aaPredicted RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CHP1Q99653 195 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CNPY3Q9BT09 278 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SLC2A11Q9BYW1 496 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 SIK2Q9H0K1 926 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 THAP2Q9H0W7 228 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 KCNH6Q9H252 994 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 LUC7LQ9NQ29 371 aaKnown RBP11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 DLGAP2Q9P1A6 1054 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
CSPG4P1Y-201ENST00000306641 IMPACTQ9P2X3 320 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms