RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 DLG4P78352 724 aa14.26□□□□□ -0.13
PRKCB-201ENST00000303531 NFE2Q16621 373 aaPredicted RBP14.26□□□□□ -0.13
PRKCB-201ENST00000303531 TTMPQ5BVD1 217 aa14.26□□□□□ -0.13
PRKCB-201ENST00000303531 KCNT2Q6UVM3 1135 aa14.26□□□□□ -0.13
PRKCB-201ENST00000303531 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
PRKCB-201ENST00000303531 TAS2R14Q9NYV8 317 aa14.26□□□□□ -0.13
PRKCB-201ENST00000303531 COL3A1P02461 1466 aaPredicted RBP14.26□□□□□ -0.13
PRKCB-201ENST00000303531 GAKO14976 1311 aa14.26□□□□□ -0.13
PRKCB-201ENST00000303531 ACKR2O00590 384 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 VAPBO95292 243 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 CRABP2P29373 138 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 SKIV2L2P42285 1042 aaKnown RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 NPY2RP49146 381 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 SLC6A3Q01959 620 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 FASTKQ14296 549 aaKnown RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ARHGAP17Q68EM7 881 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 SLC27A1Q6PCB7 646 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 DEFB106AQ8N104 65 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 MTERF3Q96E29 417 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RGS18Q9NS28 235 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 CROTQ9UKG9 612 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 APOC4-APOC2K7ER74 178 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 KATNA1O75449 491 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 APOC2P02655 101 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 HMGCRP04035 888 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 EIF4BP23588 611 aaKnown RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 WDR59Q6PJI9 974 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 SLC2A14Q8TDB8 520 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 FIG4Q92562 907 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 APBA2Q99767 749 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 COPS7BQ9H9Q2 264 aaPredicted RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RAMP2O60895 175 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ZSCAN5DPP0CG00 497 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ITGB6P18564 788 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ZNF513Q8N8E2 541 aaPredicted RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 SLC16A10Q8TF71 515 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 PARVBQ9HBI1 364 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RRN3Q9NYV6 651 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 LINC00854A0A1B0GVQ3 168 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 PARNO95453 639 aaKnown RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RAG1P15918 1043 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 TUBP50607 506 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ALDH5A1P51649 535 aaPredicted RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 DPYSL3Q14195 570 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 USP6NLQ92738 828 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 MID1IP1Q9NPA3 183 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 TRHDEQ9UKU6 1024 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 HOXA2O43364 376 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RBL1P28749 1068 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 CASP5P51878 434 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 KPNA1P52294 538 aaPredicted RBP14.25□□□□□ -0.13
PRKCB-201ENST00000303531 TBX4P57082 545 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 SPDYCQ5MJ68 293 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 FBXO39Q8N4B4 442 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 C10orf53Q8N6V4 93 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RNF148Q8N7C7 305 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 PRKD2Q9BZL6 878 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 E5RJQ4 531 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RENBPP51606 427 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 RAD23AP54725 363 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 CDK16Q00536 496 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 PLEKHA7Q6IQ23 1121 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 DHFR2Q86XF0 187 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 WDR48Q8TAF3 677 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 OPTNQ96CV9 577 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ADGRB1O14514 1584 aa14.25□□□□□ -0.13
PRKCB-201ENST00000303531 ALDH1A2O94788 518 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 ALADP13716 330 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 RPS7P62081 194 aaKnown RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 KRT78Q8N1N4 520 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 KAT5Q92993 513 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 SIKE1Q9BRV8 207 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 DPY30Q9C005 99 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 ANKRD6Q9Y2G4 727 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 NKRFO15226 690 aaKnown RBP eCLIP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 STAU1O95793 577 aaKnown RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 IL5RAQ01344 420 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 PPP3CAQ08209 521 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 CYP4Z1Q86W10 505 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 TBL1YQ9BQ87 522 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 ROGDIQ9GZN7 287 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 KRCC1Q9NPI7 259 aaPredicted RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 PADI4Q9UM07 663 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 PDE2AO00408 941 aaPredicted RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 RPA3P35244 121 aaPredicted RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 RRP1BQ14684 758 aaKnown RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 EPS8L1Q8TE68 723 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 ATXN3LQ9H3M9 355 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 NDUFAF1Q9Y375 327 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 IFNA14P01570 189 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 HSMCR30P0CW71 290 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 CCDC130P13994 396 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 OR1E1P30953 314 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 ANGPT1Q15389 498 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 FAM98BQ52LJ0 330 aaKnown RBP14.24□□□□□ -0.13
PRKCB-201ENST00000303531 LUZP2Q86TE4 346 aa14.24□□□□□ -0.13
PRKCB-201ENST00000303531 FNDC5Q8NAU1 212 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms