RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SHHQ15465 462 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 HIF1AQ16665 826 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 TNFAIP8L3Q5GJ75 292 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 KCNT2Q6UVM3 1135 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 SCD5Q86SK9 330 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 SCN4BQ8IWT1 228 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 RNF168Q8IYW5 571 aaPredicted RBP12.4□□□□□ -0.42
TPM3-202ENST00000302206 SCAMP5Q8TAC9 235 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 TFB1MQ8WVM0 346 aaKnown RBP12.4□□□□□ -0.42
TPM3-202ENST00000302206 EDEM1Q92611 657 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 SERPINB12Q96P63 405 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 EPAS1Q99814 870 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 CCDC77Q9BR77 488 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 MAGEB5Q9BZ81 275 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
TPM3-202ENST00000302206 C10orf88Q9H8K7 445 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 PPCSQ9HAB8 311 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
TPM3-202ENST00000302206 RAPGEFL1Q9UHV5 662 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
TPM3-202ENST00000302206 TMEM265A0A087WTH1 108 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 SYNJ2BP-COX16A0A087WUM0 186 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 A0A087WUV0 522 aaPredicted RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 RASGRF2O14827 1237 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 PPP1R12AO14974 1030 aaPredicted RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 SHOX2O60902 331 aaPredicted RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 STK10O94804 968 aaKnown RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 NR1D1P20393 614 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 ALDH7A1P49419 539 aaKnown RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 TPI1P60174 286 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 RPL10AP62906 217 aaKnown RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 NRG1Q02297 640 aaPredicted RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 KYNUQ16719 465 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 USP41Q3LFD5 358 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.434e-6■□□□□ 9.7
TPM3-202ENST00000302206 DEFB128Q7Z7B8 93 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 CEP57Q86XR8 500 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
TPM3-202ENST00000302206 MCUQ8NE86 351 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 TET1Q8NFU7 2136 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 ADAM32Q8TC27 787 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 ZBTB9Q96C00 473 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 VWCEQ96DN2 955 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 KLC2Q9H0B6 622 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 CWH43Q9H720 699 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 SAYSD1Q9NPB0 183 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 ETNK2Q9NVF9 386 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 CLIC5Q9NZA1 410 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 COX16Q9P0S2 106 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 MTRRQ9UBK8 725 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 ATP11BQ9Y2G3 1177 aa12.39□□□□□ -0.43
TPM3-202ENST00000302206 A0A1W2PQH9 124 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 I6L893 689 aaPredicted RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 KIAA0355O15063 1070 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 RGS16O15492 202 aaPredicted RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 CREB3O43889 395 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 MFSD11O43934 449 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 ACSL3O95573 720 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 TIMP1P01033 207 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 AMHP03971 560 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 SLC2A3P11169 496 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 CPB1P15086 417 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 ERCC2P18074 760 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 TPSB2P20231 275 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 ATP5DP30049 168 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 CCR1P32246 355 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 SERPINB6P35237 376 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 FDFT1P37268 417 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 CDR1P51861 262 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 ZNF33AQ06730 810 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 RASA2Q15283 850 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 TPSAB1Q15661 275 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 RTP2Q5QGT7 225 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 ACBD5Q5T8D3 534 aaPredicted RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 KCTD16Q68DU8 428 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 HEATR6Q6AI08 1181 aaKnown RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 PDIK1LQ8N165 341 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 SPDYE1Q8NFV5 336 aaPredicted RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 HTR3CQ8WXA8 447 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 TOP1MTQ969P6 601 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 ZNF689Q96CS4 500 aaPredicted RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 PWWP2AQ96N64 755 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 TKTL2Q9H0I9 626 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 TMPRSS4Q9NRS4 437 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 OLA1Q9NTK5 396 aaKnown RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 FETUBQ9UGM5 382 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 LGALS13Q9UHV8 139 aa12.38□□□□□ -0.43
TPM3-202ENST00000302206 XPO7Q9UIA9 1087 aaKnown RBP12.38□□□□□ -0.43
TPM3-202ENST00000302206 COL4A6Q14031 1691 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms