RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DCAKDQ8WVC6 231 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 XPNPEP3Q9NQH7 507 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 FZD10Q9ULW2 581 aa22.64■■□□□ 1.21
TPM4-201ENST00000300933 BCLAF3A2AJT9 711 aaKnown RBP22.63■■□□□ 1.21
TPM4-201ENST00000300933 CXorf49A8MYA2 514 aaPredicted RBP22.63■■□□□ 1.21
TPM4-201ENST00000300933 MFSD11O43934 449 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 UGT1A9O60656 530 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 VAV1P15498 845 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 EPHB2P29323 1055 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 SKIV2L2P42285 1042 aaKnown RBP22.63■■□□□ 1.21
TPM4-201ENST00000300933 IFRD2Q12894 506 aaPredicted RBP22.63■■□□□ 1.21
TPM4-201ENST00000300933 BSPRYQ5W0U4 402 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 LONP2Q86WA8 852 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 RIBC1Q8N443 379 aaPredicted RBP22.63■■□□□ 1.21
TPM4-201ENST00000300933 PGLYRP2Q96PD5 576 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 UGT1A7Q9HAW7 530 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 UGT1A10Q9HAW8 530 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 UGT1A8Q9HAW9 530 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 CHKBQ9Y259 395 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 TRPM7Q96QT4 1865 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 TPBGLP0DKB5 382 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 MXRA7P84157 204 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 MFSD14CQ5VZR4 134 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 SERINC5Q86VE9 423 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 CCNYQ8ND76 341 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 LRRC37BQ96QE4 947 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 TMEM209Q96SK2 561 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 ARHGEF4Q9NR80 690 aa22.63■■□□□ 1.21
TPM4-201ENST00000300933 TTC3P53804 2025 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 ENTPD5O75356 428 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 CBX6O95503 412 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 ASMTLO95671 621 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 ITGB1P05556 798 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 ARL4AP40617 200 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 SESN3P58005 492 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 DEUP1Q05D60 604 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 FAAP100Q0VG06 881 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 AP1B1Q10567 949 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 SLC45A4Q5BKX6 768 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 RSPH3Q86UC2 560 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 DENND1AQ8TEH3 1009 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 KLC2Q9H0B6 622 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 SLC17A7Q9P2U7 560 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 SLC24A2Q9UI40 661 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 LRRC42Q9Y546 428 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 WFS1O76024 890 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 NCAM1P13591 858 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 IRF5Q13568 498 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 FAM35AQ86V20 835 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 PPM1NQ8N819 430 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 TSC22D3Q99576 134 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 PLAC1Q9HBJ0 212 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 NUP205Q92621 2012 aa22.62■■□□□ 1.21
TPM4-201ENST00000300933 CHADO15335 359 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 IL9RQ01113 521 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 OLIG2Q13516 323 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 HEATR6Q6AI08 1181 aaKnown RBP22.61■■□□□ 1.21
TPM4-201ENST00000300933 LVRNQ6Q4G3 990 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 ADGRD1Q6QNK2 874 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 UNC5BQ8IZJ1 945 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 TEX9Q8N6V9 391 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 TBC1D10AQ9BXI6 508 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 LRMDAQ9H2I8 198 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 SPC25Q9HBM1 224 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 ZC3H7BQ9UGR2 993 aaKnown RBP22.61■■□□□ 1.21
TPM4-201ENST00000300933 ACTL7BQ9Y614 415 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 USP3Q9Y6I4 520 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 SCN10AQ9Y5Y9 1956 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 ADRA1DP25100 572 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 PPP1R21Q6ZMI0 780 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 STRADAQ7RTN6 431 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 LMNTD2Q8IXW0 634 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.61■■□□□ 1.21
TPM4-201ENST00000300933 RNF139Q8WU17 664 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 ADAM2Q99965 735 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 PIDD1Q9HB75 910 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 PHTF1Q9UMS5 762 aa22.61■■□□□ 1.21
TPM4-201ENST00000300933 TYROBPO43914 113 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 NEFHP12036 1026 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 PTDSS1P48651 473 aaKnown RBP22.6■■□□□ 1.21
TPM4-201ENST00000300933 PTK7Q13308 1070 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 TRMT10BQ6PF06 316 aaKnown RBP22.6■■□□□ 1.21
TPM4-201ENST00000300933 SLC30A9Q6PML9 568 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 SERAC1Q96JX3 654 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 NPY6RQ99463 290 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 LAMA3Q16787 3333 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 BDNFP23560 247 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 NOS2P35228 1153 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 FCGRTP55899 365 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 CCDC15Q0P6D6 951 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 VPS52Q8N1B4 723 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 STKLD1Q8NE28 680 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 TCP10LQ8TDR4 215 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 DEPDC1BQ8WUY9 529 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 RTP4Q96DX8 246 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 CYTH2Q99418 400 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 SLC38A7Q9NVC3 462 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 TMLHEQ9NVH6 421 aa22.6■■□□□ 1.21
TPM4-201ENST00000300933 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.59■■□□□ 1.21
TPM4-201ENST00000300933 KCNK1O00180 336 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms