RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ARFGAP1Q8N6T3 406 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF781Q8N8C0 355 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 NTPCRQ9BSD7 190 aaKnown RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 FRMD8Q9BZ67 464 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 RAB6CQ9H0N0 254 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 TELO2Q9Y4R8 837 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 PPME1Q9Y570 386 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ERBB2P04626 1255 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 SDC4P31431 198 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 GLRBP48167 497 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 SLC9B1Q4ZJI4 515 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 C16orf87Q6PH81 154 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 CYP2R1Q6VVX0 501 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 CAND1Q86VP6 1230 aaKnown RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 DSELQ8IZU8 1212 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 METTL25Q8N6Q8 603 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 RNF157Q96PX1 679 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 UNKQ9C0B0 810 aaKnown RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 TIMMDC1Q9NPL8 285 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 RNF146Q9NTX7 359 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 KPNA7A9QM74 516 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 BOLA2-SMG1P6H3BVE0 249 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 FOXD2O60548 495 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 SNNO75324 88 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 MGAT1P26572 445 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 PTPN7P35236 360 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 HSD17B4P51659 736 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 NAA20P61599 178 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 XKR3Q5GH77 459 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 MBLAC2Q68D91 279 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 PATL1Q86TB9 770 aaKnown RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 MYO1HQ8N1T3 1032 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 PLD5Q8N7P1 536 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 PDCD6IPQ8WUM4 868 aaKnown RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 SLC4A5Q9BY07 1137 aa11.72□□□□□ -0.53
TRUB1-201ENST00000298746 OXCT2Q9BYC2 517 aaPredicted RBP11.72□□□□□ -0.53
TRUB1-201ENST00000298746 NFASCO94856 1347 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 LAMB2P55268 1798 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 C3orf70A6NLC5 250 aaPredicted RBP11.71□□□□□ -0.53
TRUB1-201ENST00000298746 ADCY6O43306 1168 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 TPST1O60507 370 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 METTL18O95568 372 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 FGF3P11487 239 aaPredicted RBP11.71□□□□□ -0.53
TRUB1-201ENST00000298746 ME2P23368 584 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 ADORA2AP29274 412 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 SH2D5Q6ZV89 423 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 CDKL3Q8IVW4 592 aaPredicted RBP11.71□□□□□ -0.53
TRUB1-201ENST00000298746 PCDH20Q8N6Y1 951 aaKnown RBP11.71□□□□□ -0.53
TRUB1-201ENST00000298746 GIPC3Q8TF64 312 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
TRUB1-201ENST00000298746 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 OR52B2Q96RD2 323 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 CROCCQ5TZA2 2017 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 ANKRD12Q6UB98 2062 aa11.71□□□□□ -0.53
TRUB1-201ENST00000298746 NOL3O60936 208 aaKnown RBP11.71□□□□□ -0.54
TRUB1-201ENST00000298746 IL1BP01584 269 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 SMIM18P0DKX4 95 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 MCF2P10911 925 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 NPR1P16066 1061 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 PIK3R1P27986 724 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 PSMD7P51665 324 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 CCDC14Q49A88 953 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 DACT2Q5SW24 774 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 NIPA1Q7RTP0 329 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 KBTBD6Q86V97 674 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 C7orf31Q8N865 590 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.54
TRUB1-201ENST00000298746 NLRP4Q96MN2 994 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF778Q96MU6 729 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 PKP2Q99959 881 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 CNPY3Q9BT09 278 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 ILKAPQ9H0C8 392 aaPredicted RBP11.71□□□□□ -0.54
TRUB1-201ENST00000298746 WDR41Q9HAD4 459 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 PXMP2Q9NR77 195 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 COPG2Q9UBF2 871 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 STK39Q9UEW8 545 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 CIDEBQ9UHD4 219 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 TLK1Q9UKI8 766 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 RAB26Q9ULW5 256 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 SH3GLB1Q9Y371 365 aa11.71□□□□□ -0.54
TRUB1-201ENST00000298746 PDLIM1O00151 329 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 ZBTB14O43829 449 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 ASNSP08243 561 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TFE3P19532 575 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 STT3AP46977 705 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 MAPK10P53779 464 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 MTTPP55157 894 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 CDH15P55291 814 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SNAPC2Q13487 334 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 ADGRE1Q14246 886 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 PTK2BQ14289 1009 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 GRM2Q14416 872 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 KLHL35Q6PF15 583 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms