RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 KLHL8Q9P2G9 620 aaPredicted RBP13.96□□□□□ -0.18
TTC39B-201ENST00000297615 CPSF2Q9P2I0 782 aaKnown RBP13.96□□□□□ -0.18
TTC39B-201ENST00000297615 DFFAO00273 331 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 CRHR2Q13324 411 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 DLG2Q15700 870 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 PPP1R2P3Q6NXS1 205 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 TNS4Q8IZW8 715 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 LINC01465Q8N7H1 131 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 NIPA2Q8N8Q9 360 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 OR52K1Q8NGK4 314 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 CLPTM1LQ96KA5 538 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 VPS11Q9H270 941 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 PTPRFP10586 1907 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 NRCAMQ92823 1304 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 ESRRAP11474 423 aaPredicted RBP13.95□□□□□ -0.18
TTC39B-201ENST00000297615 CCND1P24385 295 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 ATICP31939 592 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 SERPINB4P48594 390 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 CAP1Q01518 475 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 BST2Q10589 180 aaKnown RBP13.95□□□□□ -0.18
TTC39B-201ENST00000297615 UBXN11Q5T124 520 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 RSPH3Q86UC2 560 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 RELL1Q8IUW5 271 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 HIPK4Q8NE63 616 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 ATP2A3Q93084 1043 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.95□□□□□ -0.18
TTC39B-201ENST00000297615 KANSL3Q9P2N6 904 aa13.95□□□□□ -0.18
TTC39B-201ENST00000297615 H3BRJ5 948 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 CCL22O00626 93 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 SLC4A1P02730 911 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 ZNF865P0CJ78 1059 aaPredicted RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 AVPR1AP37288 418 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 GSCP56915 257 aaPredicted RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 BOLA3Q53S33 107 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 UNC5AQ6ZN44 842 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 ANKRD52Q8NB46 1076 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 FBXO27Q8NI29 283 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 KLC2Q9H0B6 622 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 FIS1Q9Y3D6 152 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 MEI4A8MW99 385 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 RNF103O00237 685 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 RPL10AP62906 217 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 PDE1BQ01064 536 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 PEX6Q13608 980 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 PAQR9Q6ZVX9 377 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 TRPV1Q8NER1 839 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 ZNF778Q96MU6 729 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 MIPEPQ99797 713 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 NMUR2Q9GZQ4 415 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 MTMR10Q9NXD2 777 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 NEBLO76041 1014 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 FLT3LGP49771 235 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 KPNB1Q14974 876 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 PCSK7Q16549 785 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 KHDC1Q4VXA5 237 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 TIGD5Q53EQ6 642 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 NOMO2Q5JPE7 1267 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 TDRPQ86YL5 185 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 NUDCD3Q8IVD9 361 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 SPATA22Q8NHS9 363 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 P2RY11Q96G91 374 aa13.94□□□□□ -0.18
TTC39B-201ENST00000297615 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 GOLGA4Q13439 2230 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
TTC39B-201ENST00000297615 M0QZ92 97 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 MGEA5O60502 916 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 F2P00734 622 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 JCHAINP01591 159 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 GLRBP48167 497 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 GPR15P49685 360 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 BCAT1P54687 386 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 MCCD1P59942 119 aaPredicted RBP13.93□□□□□ -0.18
TTC39B-201ENST00000297615 INCA1Q0VD86 236 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 BST1Q10588 318 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 CERCAMQ5T4B2 595 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 CLEC20AQ6ZU45 233 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 OTOP3Q7RTS5 596 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 TFAP2DQ7Z6R9 452 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 BHMTQ93088 406 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 AGAP2Q99490 1192 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 TMLHEQ9NVH6 421 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 MPP6Q9NZW5 540 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 EEF2KO00418 725 aaKnown RBP13.93□□□□□ -0.18
TTC39B-201ENST00000297615 KRT36O76013 467 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 KRT37O76014 449 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 CCNB1P14635 433 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 STIP1P31948 543 aaKnown RBP13.93□□□□□ -0.18
TTC39B-201ENST00000297615 AQP5P55064 265 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 SLC8A3P57103 927 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 RINLQ6ZS11 566 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 TMEM110Q86TL2 294 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 POU5F2Q8N7G0 328 aa13.93□□□□□ -0.18
TTC39B-201ENST00000297615 SHCBP1Q8NEM2 672 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms